Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC17_RS05415 | Genome accession | NZ_CP010475 |
| Coordinates | 1008345..1008647 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC073 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1003345..1013647
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC17_RS05390 (RC17_05380) | rpsR | 1003707..1003967 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC17_RS05395 (RC17_05385) | lon | 1004028..1006403 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC17_RS05400 (RC17_05390) | - | 1006420..1007067 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC17_RS05405 (RC17_05395) | fliW | 1007228..1007617 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC17_RS05410 (RC17_05400) | proC | 1007617..1008348 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC17_RS05415 (RC17_05405) | ctsT | 1008345..1008647 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC17_RS05420 (RC17_05410) | - | 1008644..1009306 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC17_RS05425 (RC17_05415) | - | 1009303..1009755 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC17_RS05430 (RC17_05420) | hemD | 1009752..1010381 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC17_RS05435 (RC17_05425) | thiE | 1010359..1010991 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC17_RS05440 (RC17_05430) | thiD | 1010981..1011793 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC17_RS05445 (RC17_05435) | - | 1011790..1012476 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC17_RS05450 (RC17_05440) | - | 1012473..1013234 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137912 RC17_RS05415 WP_002932767.1 1008345..1008647(+) (ctsT) [Campylobacter jejuni strain CJ677CC073]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137912 RC17_RS05415 WP_002932767.1 1008345..1008647(+) (ctsT) [Campylobacter jejuni strain CJ677CC073]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |