Detailed information
Bioinformatically predicted
Overview
| Name | ctsX | Type | Machinery gene |
| Locus tag | RC42_RS06950 | Genome accession | NZ_CP010474 |
| Coordinates | 1336413..1337000 (-) | Length | 195 a.a. |
| NCBI ID | WP_002932306.1 | Uniprot ID | A0A5T1D196 |
| Organism | Campylobacter jejuni strain CJ677CC536 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1331413..1342000
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC42_RS06930 (RC42_06920) | - | 1332161..1332925 (+) | 765 | WP_002932297.1 | TIGR02757 family protein | - |
| RC42_RS06935 (RC42_06925) | - | 1332928..1333692 (+) | 765 | WP_002932298.1 | TSUP family transporter | - |
| RC42_RS06940 (RC42_06930) | ctsF | 1333689..1334867 (-) | 1179 | WP_002932300.1 | type II secretion system F family protein | Machinery gene |
| RC42_RS06945 (RC42_06935) | ctsE | 1334864..1336423 (-) | 1560 | WP_032598692.1 | GspE/PulE family protein | Machinery gene |
| RC42_RS06950 (RC42_06940) | ctsX | 1336413..1337000 (-) | 588 | WP_002932306.1 | hypothetical protein | Machinery gene |
| RC42_RS06955 (RC42_06945) | ctsP | 1337004..1337610 (-) | 607 | Protein_1367 | ATP-binding protein | - |
| RC42_RS06960 (RC42_06950) | mshL | 1337603..1339015 (-) | 1413 | Protein_1368 | pilus (MSHA type) biogenesis protein MshL | - |
| RC42_RS06965 (RC42_06955) | ctsR | 1338993..1339304 (-) | 312 | WP_002932309.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 23439.52 Da Isoelectric Point: 9.8409
>NTDB_id=137896 RC42_RS06950 WP_002932306.1 1336413..1337000(-) (ctsX) [Campylobacter jejuni strain CJ677CC536]
MQERIKELELRYKYFLLKKYLKYLFLIVLILVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKIFQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
MQERIKELELRYKYFLLKKYLKYLFLIVLILVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKIFQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
Nucleotide
Download Length: 588 bp
>NTDB_id=137896 RC42_RS06950 WP_002932306.1 1336413..1337000(-) (ctsX) [Campylobacter jejuni strain CJ677CC536]
ATGCAAGAAAGAATTAAAGAACTTGAGCTTAGGTATAAATATTTTTTACTTAAAAAATATTTAAAATATTTATTTTTAAT
TGTTTTAATCTTAGTGATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAAG
CTATTGAACATAAAAAGCATTTAGAGCAAAAGATTTTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGTAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCTTTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGTGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
ATGCAAGAAAGAATTAAAGAACTTGAGCTTAGGTATAAATATTTTTTACTTAAAAAATATTTAAAATATTTATTTTTAAT
TGTTTTAATCTTAGTGATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAAG
CTATTGAACATAAAAAGCATTTAGAGCAAAAGATTTTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGTAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCTTTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGTGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsX | Campylobacter jejuni subsp. jejuni 81-176 |
97.949 |
100 |
0.979 |