Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC42_RS05480 | Genome accession | NZ_CP010474 |
| Coordinates | 1044917..1045219 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC536 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1039917..1050219
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC42_RS05455 (RC42_05440) | rpsR | 1040279..1040539 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC42_RS05460 (RC42_05445) | lon | 1040600..1042975 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC42_RS05465 (RC42_05450) | - | 1042992..1043639 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC42_RS05470 (RC42_05455) | fliW | 1043800..1044189 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC42_RS05475 (RC42_05460) | proC | 1044189..1044920 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC42_RS05480 (RC42_05465) | ctsT | 1044917..1045219 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC42_RS05485 (RC42_05470) | - | 1045216..1045878 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC42_RS05490 (RC42_05475) | - | 1045875..1046327 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC42_RS05495 (RC42_05480) | hemD | 1046324..1046953 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC42_RS05500 (RC42_05485) | thiE | 1046931..1047563 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC42_RS05505 (RC42_05490) | thiD | 1047553..1048365 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC42_RS05510 (RC42_05495) | - | 1048362..1049048 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC42_RS05515 (RC42_05500) | - | 1049045..1049806 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137889 RC42_RS05480 WP_002932767.1 1044917..1045219(+) (ctsT) [Campylobacter jejuni strain CJ677CC536]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137889 RC42_RS05480 WP_002932767.1 1044917..1045219(+) (ctsT) [Campylobacter jejuni strain CJ677CC536]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |