Detailed information NTG0137858

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: RC40_RS04885
• Genome accession: NZ_CP010473
• Coordinates: 920527..921258 (+)
• Length: 243 a.a.
• NCBI ID: WP_002932769.1
• Uniprot ID: A0A5T0Q210
• Organism: Campylobacter jejuni strain CJ677CC534
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 915527..926258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RC40_RS04855 (RC40_04850)	rpsF	915669..916046 (+)	378	WP_002812868.1	30S ribosomal protein S6	-
RC40_RS04860 (RC40_04855)	ssb	916055..916606 (+)	552	WP_002932771.1	single-stranded DNA-binding protein	-
RC40_RS04865 (RC40_04860)	rpsR	916617..916877 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
RC40_RS04870 (RC40_04865)	lon	916938..919313 (-)	2376	WP_002866098.1	endopeptidase La	-
RC40_RS04875 (RC40_04870)	-	919330..919977 (-)	648	WP_002877748.1	outer membrane protein assembly factor BamD	-
RC40_RS04880 (RC40_04875)	fliW	920138..920527 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
RC40_RS04885 (RC40_04880)	proC	920527..921258 (+)	732	WP_002932769.1	pyrroline-5-carboxylate reductase	Machinery gene
RC40_RS04890 (RC40_04885)	ctsT	921255..921557 (+)	303	WP_002932767.1	transformation system protein	Machinery gene
RC40_RS04895 (RC40_04890)	-	921554..922216 (+)	663	WP_002866103.1	hypothetical protein	-
RC40_RS04900 (RC40_04895)	-	922213..922665 (+)	453	WP_002869049.1	hypothetical protein	-
RC40_RS04905 (RC40_04900)	hemD	922662..923291 (-)	630	WP_002932761.1	uroporphyrinogen-III synthase	-
RC40_RS04910 (RC40_04905)	thiE	923269..923901 (-)	633	WP_002932757.1	thiamine phosphate synthase	-
RC40_RS04915 (RC40_04910)	thiD	923891..924703 (-)	813	WP_002869047.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
RC40_RS04920 (RC40_04915)	-	924700..925386 (-)	687	WP_002932755.1	3-methyladenine DNA glycosylase	-
RC40_RS04925 (RC40_04920)	-	925383..926144 (-)	762	WP_002932753.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26602.04 Da
• Isoelectric Point: 8.9105

>NTDB_id=137858 RC40_RS04885 WP_002932769.1 920527..921258(+) (proC) [Campylobacter jejuni strain CJ677CC534]
MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQILKGRARIL
ISVLANVDFEKLQTIKAQNYVRIMPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=137858 RC40_RS04885 WP_002932769.1 920527..921258(+) (proC) [Campylobacter jejuni strain CJ677CC534]
ATGCTCTATATACTTGCAAATGGAGCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCACCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTGGCTTTCAAACCTTATGCTTTAGAAAATATTGCCCAAATACTAAAAGGACGAGCACGCATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATGCCTAATAC
AGCAGCTAAATATAAGGCTTCAACTACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGTTCAGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGTATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

3D structure

• AlphaFold DB: A0A5T0Q210

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	98.354	100	0.984