Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC25_RS05075 | Genome accession | NZ_CP010471 |
| Coordinates | 963240..963542 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC519 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 958240..968542
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC25_RS05050 (RC25_05045) | rpsR | 958602..958862 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC25_RS05055 (RC25_05050) | lon | 958923..961298 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC25_RS05060 (RC25_05055) | - | 961315..961962 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC25_RS05065 (RC25_05060) | fliW | 962123..962512 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC25_RS05070 (RC25_05065) | proC | 962512..963243 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC25_RS05075 (RC25_05070) | ctsT | 963240..963542 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC25_RS05080 (RC25_05075) | - | 963539..964201 (+) | 663 | WP_048818624.1 | hypothetical protein | - |
| RC25_RS05085 (RC25_05080) | - | 964198..964650 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC25_RS05090 (RC25_05085) | hemD | 964647..965276 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC25_RS05095 (RC25_05090) | thiE | 965254..965886 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC25_RS05100 (RC25_05095) | thiD | 965876..966688 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC25_RS05105 (RC25_05100) | - | 966685..967371 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC25_RS05110 (RC25_05105) | - | 967368..968129 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137805 RC25_RS05075 WP_002932767.1 963240..963542(+) (ctsT) [Campylobacter jejuni strain CJ677CC519]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137805 RC25_RS05075 WP_002932767.1 963240..963542(+) (ctsT) [Campylobacter jejuni strain CJ677CC519]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |