Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   ACT75_RS06800 Genome accession   NZ_CP012959
Coordinates   1402621..1403127 (+) Length   168 a.a.
NCBI ID   WP_005538559.1    Uniprot ID   A0A142G0T2
Organism   Aggregatibacter actinomycetemcomitans strain 624     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1397621..1408127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACT75_RS06760 (ACT75_06755) rep 1397675..1399690 (+) 2016 WP_005539108.1 DNA helicase Rep -
  ACT75_RS06780 (ACT75_06775) - 1400206..1400586 (-) 381 WP_005549001.1 PRD domain-containing protein -
  ACT75_RS06785 (ACT75_06780) - 1400714..1401316 (+) 603 WP_005549003.1 beta-phosphoglucomutase family hydrolase -
  ACT75_RS06790 (ACT75_06785) - 1401316..1401921 (+) 606 WP_005538557.1 sugar O-acetyltransferase -
  ACT75_RS06795 (ACT75_06790) - 1401924..1402409 (+) 486 WP_005538558.1 YqaA family protein -
  ACT75_RS06800 (ACT75_06795) luxS 1402621..1403127 (+) 507 WP_005538559.1 S-ribosylhomocysteine lyase Regulator
  ACT75_RS06805 (ACT75_06800) - 1403590..1404828 (+) 1239 WP_005538561.1 DUF4123 domain-containing protein -
  ACT75_RS06810 (ACT75_06805) - 1404815..1406758 (+) 1944 WP_005550646.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 168 a.a.        Molecular weight: 18944.70 Da        Isoelectric Point: 5.9223

>NTDB_id=137742 ACT75_RS06800 WP_005538559.1 1402621..1403127(+) (luxS) [Aggregatibacter actinomycetemcomitans strain 624]
MPLLDSFKVDHTRMKAPAVRIAKIMRTPKGDNITVFDLRFTIPNKENLPPKGIHTLEHLFAGFMRDHLNGKDVEIIDISP
MGCRTGFYMSLIGTPNEAQIAQAWAASMQDILNVKKQSEIPELNEYQCGTYTEHSLEEAHQIAQNVLDRGIGVNKNEDLT
LDESLLKQ

Nucleotide


Download         Length: 507 bp        

>NTDB_id=137742 ACT75_RS06800 WP_005538559.1 1402621..1403127(+) (luxS) [Aggregatibacter actinomycetemcomitans strain 624]
ATGCCATTACTTGATAGTTTTAAAGTGGATCACACCCGAATGAAGGCGCCTGCCGTACGTATTGCGAAGATCATGCGCAC
TCCAAAAGGAGACAATATCACCGTTTTTGATCTTCGTTTCACGATACCTAACAAAGAAAACTTGCCACCGAAAGGTATTC
ACACCCTTGAACATTTATTTGCCGGTTTTATGCGAGATCACTTAAATGGCAAGGATGTGGAAATTATCGATATTTCCCCG
ATGGGCTGTCGCACCGGTTTTTATATGTCCTTAATCGGCACGCCAAATGAAGCCCAAATCGCACAGGCGTGGGCAGCTTC
GATGCAGGATATTCTGAATGTAAAGAAACAAAGCGAAATCCCTGAACTAAATGAGTACCAATGCGGCACTTACACCGAGC
ATTCTTTGGAAGAAGCACATCAAATTGCACAAAATGTGTTAGATCGCGGTATCGGCGTAAATAAAAATGAAGATTTAACC
TTAGACGAAAGCTTATTAAAACAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A142G0T2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

72.619

100

0.726