Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC01_RS05360 | Genome accession | NZ_CP010467 |
| Coordinates | 1010285..1010587 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC024 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1005285..1015587
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC01_RS05335 (RC01_05335) | rpsR | 1005647..1005907 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC01_RS05340 (RC01_05340) | lon | 1005968..1008343 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC01_RS05345 (RC01_05345) | - | 1008360..1009007 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC01_RS05350 (RC01_05350) | fliW | 1009168..1009557 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC01_RS05355 (RC01_05355) | proC | 1009557..1010288 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC01_RS05360 (RC01_05360) | ctsT | 1010285..1010587 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC01_RS05365 (RC01_05365) | - | 1010584..1011246 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC01_RS05370 (RC01_05370) | - | 1011243..1011695 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC01_RS05375 (RC01_05375) | hemD | 1011692..1012321 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC01_RS05380 (RC01_05380) | thiE | 1012299..1012931 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC01_RS05385 (RC01_05385) | thiD | 1012921..1013733 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC01_RS05390 (RC01_05390) | - | 1013730..1014416 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC01_RS05395 (RC01_05395) | - | 1014413..1015174 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137699 RC01_RS05360 WP_002932767.1 1010285..1010587(+) (ctsT) [Campylobacter jejuni strain CJ677CC024]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137699 RC01_RS05360 WP_002932767.1 1010285..1010587(+) (ctsT) [Campylobacter jejuni strain CJ677CC024]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |