Detailed information NTG0137673

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: ACT74_RS03445
• Genome accession: NZ_CP012958
• Coordinates: 731154..732578 (+)
• Length: 474 a.a.
• NCBI ID: WP_187370360.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain VT1169
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 726154..737578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACT74_RS03440 (ACT74_03440)	-	730268..731139 (+)	872	Protein_684	EamA family transporter	-
ACT74_RS03445 (ACT74_03445)	sbcB	731154..732578 (+)	1425	WP_187370360.1	exodeoxyribonuclease I	Machinery gene
ACT74_RS10530	-	732660..732999 (+)	340	Protein_686	transposase	-
ACT74_RS03455 (ACT74_03455)	-	732996..733802 (+)	807	WP_014167546.1	IS3 family transposase	-
ACT74_RS11470	-	734503..734739 (+)	237	WP_411675201.1	phage/plasmid replication domain-containing protein	-
ACT74_RS03465 (ACT74_03465)	-	734702..735157 (+)	456	Protein_689	type II secretion system protein GspD	-
ACT74_RS03470 (ACT74_03470)	ftnA	735978..736463 (+)	486	WP_005544704.1	non-heme ferritin	-
ACT74_RS03475 (ACT74_03475)	ftnA	736479..736976 (+)	498	WP_005544705.1	non-heme ferritin	-
ACT74_RS11040	-	737038..737208 (-)	171	WP_005544707.1	hypothetical protein	-

Sequence

Protein

• Length: 474 a.a.
• Molecular weight: 54850.36 Da
• Isoelectric Point: 5.1197

>NTDB_id=137673 ACT74_RS03445 WP_187370360.1 731154..732578(+) (sbcB) [Aggregatibacter actinomycetemcomitans strain VT1169]
MAKNDFSFFIYDYESFGVNPATDRPAQFGGIRTDEDFNIIGEPIVLYCKQTNDYLPAPEAVLVTGITPQECNEKGLSEPE
FAAKILQEFSRPNTCVMGFNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPS
FRLEKLTEANGIAHDSAHDAMSDVYATIEMAKLIKRKQPKLFQYFFENRGKKEVEKLIDTAEMMPLVHVSGMLGNYRGNT
TLIAPLAWHPTNKNAVIVCDLTADIDDLLTKSVGELRENLYTKKETLLAAGALPVPLKLIHINKCPIVAPAKTLLPQNSE
RLGIDQELCAQNRQRLQEAKDIRQKVMDIFHQEREFDASDNVETELYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDP
RIPELLFHYRARHFYRTLNRAEQIKWQKYCRKKLDAEALQFEQRLQELAEQYSNNEENLMLLQKVYEYGTKIIG

Nucleotide

• Length: 1425 bp

>NTDB_id=137673 ACT74_RS03445 WP_187370360.1 731154..732578(+) (sbcB) [Aggregatibacter actinomycetemcomitans strain VT1169]
ATGGCAAAAAACGACTTTAGTTTTTTTATTTATGATTATGAAAGTTTTGGGGTCAATCCCGCAACGGATCGCCCGGCACA
ATTCGGTGGCATTCGCACTGACGAGGATTTTAATATTATCGGTGAGCCGATTGTTCTTTATTGCAAGCAAACTAACGATT
ATTTGCCTGCACCAGAAGCGGTTTTAGTCACCGGAATTACACCACAGGAATGCAACGAAAAAGGGCTGTCGGAACCCGAA
TTTGCCGCCAAAATTTTACAGGAATTCAGCCGTCCGAATACTTGCGTGATGGGCTTTAATAACATTCGTTATGACGATGA
AATGACCCGTTATACGTTTTACCGTAATTTTATCGATCCTTATGAATACAGCTGGAAAAACGGCAATTCCCGTTGGGATT
TACTGGATTTGGTGCGTGCTTGCTATGCGTTGCGCCCGGACGGTATTGAATGGCCTTTAGATGATGAAGGTATGCCGAGT
TTCCGCCTGGAAAAACTGACAGAGGCCAATGGAATAGCGCACGATAGTGCGCATGATGCCATGTCAGATGTGTATGCCAC
TATTGAAATGGCAAAGCTCATCAAGCGGAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGGGGTAAAAAGGAGG
TTGAAAAGCTCATCGATACCGCAGAAATGATGCCATTGGTACATGTGTCGGGAATGTTGGGGAATTATCGCGGAAATACC
ACGTTAATTGCACCTTTAGCCTGGCATCCGACGAATAAAAATGCCGTTATTGTCTGTGATTTAACTGCCGATATTGATGA
TTTATTAACAAAATCGGTAGGGGAGTTGCGTGAAAATCTTTACACCAAAAAAGAGACCTTATTGGCTGCCGGTGCATTGC
CTGTGCCATTGAAGCTCATTCATATCAATAAATGTCCGATTGTTGCGCCGGCTAAAACTTTGTTGCCACAAAACTCCGAA
CGTTTAGGTATTGATCAGGAGTTATGTGCGCAAAACCGACAACGTTTGCAGGAAGCAAAAGATATTCGCCAAAAAGTAAT
GGATATTTTTCATCAGGAACGTGAATTTGACGCTTCCGATAATGTTGAAACCGAACTGTATAACGGCTTTTTTAGTGACG
CCGATAAAAACAATATGGCGATTTTACGCAGTTTGGAACCCGAAAAATTGGCTAAACATAATCTTAGTTTTCAAGATCCA
CGAATTCCTGAATTGCTGTTCCATTATCGTGCCAGACATTTCTATCGTACATTGAACCGTGCGGAACAAATTAAATGGCA
AAAATACTGCCGTAAAAAATTAGATGCCGAGGCTTTGCAATTTGAACAACGTCTTCAAGAATTAGCCGAACAATATTCCA
ACAATGAAGAAAATCTTATGTTATTGCAAAAGGTCTATGAATATGGAACGAAAATAATCGGTTAA

Domains

Predicted by InterProScan.

• Exonuclease (RNase_T) (10-189)

• Exonuclease C-terminal (ExoI_SH3) (209-470)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	53.648	98.312	0.527