Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RB95_RS05135 | Genome accession | NZ_CP010465 |
| Coordinates | 968513..968815 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC008 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 963513..973815
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RB95_RS05110 (RB95_05110) | rpsR | 963875..964135 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RB95_RS05115 (RB95_05115) | lon | 964196..966571 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RB95_RS05120 (RB95_05120) | - | 966588..967235 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RB95_RS05125 (RB95_05125) | fliW | 967396..967785 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RB95_RS05130 (RB95_05130) | proC | 967785..968516 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RB95_RS05135 (RB95_05135) | ctsT | 968513..968815 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RB95_RS05140 (RB95_05140) | - | 968812..969474 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RB95_RS05145 (RB95_05145) | - | 969471..969923 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RB95_RS05150 (RB95_05150) | hemD | 969920..970549 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RB95_RS05155 (RB95_05155) | thiE | 970527..971159 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RB95_RS05160 (RB95_05160) | thiD | 971149..971961 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RB95_RS05165 (RB95_05165) | - | 971958..972644 (-) | 687 | WP_059119336.1 | endonuclease III domain-containing protein | - |
| RB95_RS05170 (RB95_05170) | - | 972641..973402 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137647 RB95_RS05135 WP_002932767.1 968513..968815(+) (ctsT) [Campylobacter jejuni strain CJ677CC008]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137647 RB95_RS05135 WP_002932767.1 968513..968815(+) (ctsT) [Campylobacter jejuni strain CJ677CC008]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |