Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC22_RS05070 | Genome accession | NZ_CP010464 |
| Coordinates | 961483..961785 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC094 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 956483..966785
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC22_RS05045 (RC22_05045) | rpsR | 956845..957105 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC22_RS05050 (RC22_05050) | lon | 957166..959541 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC22_RS05055 (RC22_05055) | - | 959558..960205 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC22_RS05060 (RC22_05060) | fliW | 960366..960755 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC22_RS05065 (RC22_05065) | proC | 960755..961486 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC22_RS05070 (RC22_05070) | ctsT | 961483..961785 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC22_RS05075 (RC22_05075) | - | 961782..962444 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC22_RS05080 (RC22_05080) | - | 962441..962893 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC22_RS05085 (RC22_05085) | hemD | 962890..963519 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC22_RS05090 (RC22_05090) | thiE | 963497..964129 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC22_RS05095 (RC22_05095) | thiD | 964119..964931 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC22_RS05100 (RC22_05100) | - | 964928..965614 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC22_RS05105 (RC22_05105) | - | 965611..966372 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137621 RC22_RS05070 WP_002932767.1 961483..961785(+) (ctsT) [Campylobacter jejuni strain CJ677CC094]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137621 RC22_RS05070 WP_002932767.1 961483..961785(+) (ctsT) [Campylobacter jejuni strain CJ677CC094]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |