Detailed information NTG0137540

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: RB98_RS05020
• Genome accession: NZ_CP010461
• Coordinates: 948288..949019 (+)
• Length: 243 a.a.
• NCBI ID: WP_002932769.1
• Uniprot ID: A0A5T0Q210
• Organism: Campylobacter jejuni strain CJ677CC013
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 943288..954019

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RB98_RS04990 (RB98_04985)	rpsF	943430..943807 (+)	378	WP_002812868.1	30S ribosomal protein S6	-
RB98_RS04995 (RB98_04990)	ssb	943816..944367 (+)	552	WP_002932771.1	single-stranded DNA-binding protein	-
RB98_RS05000 (RB98_04995)	rpsR	944378..944638 (+)	261	WP_059117862.1	30S ribosomal protein S18	-
RB98_RS05005 (RB98_05000)	lon	944699..947074 (-)	2376	WP_002866098.1	endopeptidase La	-
RB98_RS05010 (RB98_05005)	-	947091..947738 (-)	648	WP_002877748.1	outer membrane protein assembly factor BamD	-
RB98_RS05015 (RB98_05010)	fliW	947899..948288 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
RB98_RS05020 (RB98_05015)	proC	948288..949019 (+)	732	WP_002932769.1	pyrroline-5-carboxylate reductase	Machinery gene
RB98_RS05025 (RB98_05020)	ctsT	949016..949318 (+)	303	WP_002932767.1	transformation system protein	Machinery gene
RB98_RS05030 (RB98_05025)	-	949315..949977 (+)	663	WP_002866103.1	hypothetical protein	-
RB98_RS05035 (RB98_05030)	-	949974..950426 (+)	453	WP_002869049.1	hypothetical protein	-
RB98_RS05040 (RB98_05035)	hemD	950423..951052 (-)	630	WP_002932761.1	uroporphyrinogen-III synthase	-
RB98_RS05045 (RB98_05040)	thiE	951030..951662 (-)	633	WP_002932757.1	thiamine phosphate synthase	-
RB98_RS05050 (RB98_05045)	thiD	951652..952464 (-)	813	WP_002869047.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
RB98_RS05055 (RB98_05050)	-	952461..953147 (-)	687	WP_002932755.1	3-methyladenine DNA glycosylase	-
RB98_RS05060 (RB98_05055)	-	953144..953905 (-)	762	WP_002932753.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26602.04 Da
• Isoelectric Point: 8.9105

>NTDB_id=137540 RB98_RS05020 WP_002932769.1 948288..949019(+) (proC) [Campylobacter jejuni strain CJ677CC013]
MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQILKGRARIL
ISVLANVDFEKLQTIKAQNYVRIMPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=137540 RB98_RS05020 WP_002932769.1 948288..949019(+) (proC) [Campylobacter jejuni strain CJ677CC013]
ATGCTCTATATACTTGCAAATGGAGCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCACCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTGGCTTTCAAACCTTATGCTTTAGAAAATATTGCCCAAATACTAAAAGGACGAGCACGCATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATGCCTAATAC
AGCAGCTAAATATAAGGCTTCAACTACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGTTCAGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGTATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

3D structure

• AlphaFold DB: A0A5T0Q210

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	98.354	100	0.984