Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC39_RS05190 | Genome accession | NZ_CP010458 |
| Coordinates | 976663..976965 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC533 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 971663..981965
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC39_RS05165 (RC39_05170) | rpsR | 972025..972285 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC39_RS05170 (RC39_05175) | lon | 972346..974721 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC39_RS05175 (RC39_05180) | - | 974738..975385 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC39_RS05180 (RC39_05185) | fliW | 975546..975935 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC39_RS05185 (RC39_05190) | proC | 975935..976666 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC39_RS05190 (RC39_05195) | ctsT | 976663..976965 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC39_RS05195 (RC39_05200) | - | 976962..977624 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC39_RS05200 (RC39_05205) | - | 977621..978073 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC39_RS05205 (RC39_05210) | hemD | 978070..978699 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC39_RS05210 (RC39_05215) | thiE | 978677..979309 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC39_RS05215 (RC39_05220) | thiD | 979299..980111 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC39_RS05220 (RC39_05225) | - | 980108..980794 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC39_RS05225 (RC39_05230) | - | 980791..981552 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137463 RC39_RS05190 WP_002932767.1 976663..976965(+) (ctsT) [Campylobacter jejuni strain CJ677CC533]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137463 RC39_RS05190 WP_002932767.1 976663..976965(+) (ctsT) [Campylobacter jejuni strain CJ677CC533]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |