Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SD90_RS07245 | Genome accession | NZ_CP010450 |
| Coordinates | 1456205..1456696 (-) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain NGAS638 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1451205..1461696
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SD90_RS07230 (SD90_07245) | - | 1453935..1454879 (+) | 945 | WP_011888617.1 | magnesium transporter CorA family protein | - |
| SD90_RS07235 (SD90_07250) | - | 1455012..1455668 (+) | 657 | WP_010922629.1 | DUF1129 domain-containing protein | - |
| SD90_RS07240 (SD90_07255) | rpsR | 1455801..1456040 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| SD90_RS07245 (SD90_07260) | ssb | 1456205..1456696 (-) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| SD90_RS07250 (SD90_07265) | rpsF | 1456718..1457008 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| SD90_RS07255 (SD90_07270) | - | 1457181..1457474 (-) | 294 | WP_002983113.1 | hypothetical protein | - |
| SD90_RS07260 (SD90_07275) | mutY | 1457642..1458796 (+) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| SD90_RS07265 (SD90_07280) | - | 1458872..1459459 (+) | 588 | WP_032462795.1 | helix-turn-helix domain-containing protein | - |
| SD90_RS07270 (SD90_07285) | trxA | 1459511..1459843 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| SD90_RS07275 (SD90_07290) | - | 1459906..1460406 (-) | 501 | WP_002993246.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=137407 SD90_RS07245 WP_002983122.1 1456205..1456696(-) (ssb) [Streptococcus pyogenes strain NGAS638]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=137407 SD90_RS07245 WP_002983122.1 1456205..1456696(-) (ssb) [Streptococcus pyogenes strain NGAS638]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |