Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SD90_RS06850 Genome accession   NZ_CP010450
Coordinates   1370020..1370745 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NGAS638     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1365020..1375745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD90_RS06815 (SD90_06830) - 1365154..1365537 (+) 384 WP_002988673.1 ImmA/IrrE family metallo-endopeptidase -
  SD90_RS06820 (SD90_06835) - 1365548..1366099 (+) 552 WP_002988670.1 hypothetical protein -
  SD90_RS06825 (SD90_06840) - 1366216..1367295 (+) 1080 WP_002988667.1 site-specific integrase -
  SD90_RS06835 (SD90_06850) trmB 1367493..1368128 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SD90_RS06840 (SD90_06855) ccrZ 1368128..1368919 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  SD90_RS06845 (SD90_06860) - 1368983..1370017 (-) 1035 WP_032462804.1 ABC transporter permease -
  SD90_RS06850 (SD90_06865) pptA 1370020..1370745 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SD90_RS06855 (SD90_06870) - 1370817..1371236 (+) 420 WP_002983376.1 HIT family protein -
  SD90_RS06860 (SD90_06875) - 1371233..1371589 (+) 357 WP_002988657.1 hypothetical protein -
  SD90_RS06865 (SD90_06880) brpA 1371700..1372983 (-) 1284 WP_002994335.1 biofilm formation/cell division transcriptional regulator BrpA -
  SD90_RS06870 (SD90_06885) - 1372992..1373516 (-) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  SD90_RS06875 (SD90_06890) tsaE 1373491..1373952 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SD90_RS06880 (SD90_06895) - 1374106..1375566 (-) 1461 WP_032462803.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=137405 SD90_RS06850 WP_002983379.1 1370020..1370745(-) (pptA) [Streptococcus pyogenes strain NGAS638]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=137405 SD90_RS06850 WP_002983379.1 1370020..1370745(-) (pptA) [Streptococcus pyogenes strain NGAS638]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment