Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SD89_RS07625 Genome accession   NZ_CP010449
Coordinates   1523434..1524243 (-) Length   269 a.a.
NCBI ID   WP_023612763.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NGAS322     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1518434..1529243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD89_RS07615 (SD89_07650) smc 1518758..1522297 (-) 3540 WP_053308552.1 chromosome segregation protein SMC -
  SD89_RS07620 (SD89_07655) rnc 1522298..1522990 (-) 693 WP_002990670.1 ribonuclease III -
  SD89_RS07625 (SD89_07660) vicX 1523434..1524243 (-) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  SD89_RS07630 (SD89_07665) vicK 1524247..1525599 (-) 1353 WP_030126091.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SD89_RS07635 (SD89_07670) vicR 1525592..1526302 (-) 711 WP_002985645.1 response regulator YycF Regulator
  SD89_RS07640 (SD89_07675) - 1526464..1527498 (-) 1035 WP_186800972.1 DUF3114 domain-containing protein -
  SD89_RS07645 (SD89_07680) - 1527554..1528801 (-) 1248 WP_014407393.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=137345 SD89_RS07625 WP_023612763.1 1523434..1524243(-) (vicX) [Streptococcus pyogenes strain NGAS322]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=137345 SD89_RS07625 WP_023612763.1 1523434..1524243(-) (vicX) [Streptococcus pyogenes strain NGAS322]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGTAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment