Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SD89_RS02180 Genome accession   NZ_CP010449
Coordinates   423228..423953 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NGAS322     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 418228..428953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD89_RS02150 (SD89_02150) - 418407..419867 (+) 1461 WP_032461169.1 NCS2 family permease -
  SD89_RS02155 (SD89_02155) tsaE 420021..420482 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SD89_RS02160 (SD89_02160) - 420457..420981 (+) 525 WP_032460224.1 GNAT family N-acetyltransferase -
  SD89_RS02165 (SD89_02165) brpA 420990..422273 (+) 1284 WP_053308233.1 biofilm formation/cell division transcriptional regulator BrpA -
  SD89_RS02170 (SD89_02170) - 422384..422740 (-) 357 WP_030126323.1 hypothetical protein -
  SD89_RS02175 (SD89_02175) - 422737..423156 (-) 420 WP_002983376.1 HIT family protein -
  SD89_RS02180 (SD89_02180) pptA 423228..423953 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SD89_RS02185 (SD89_02185) - 423956..424990 (+) 1035 WP_002994331.1 ABC transporter permease -
  SD89_RS02190 (SD89_02190) ccrZ 425054..425845 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  SD89_RS02195 (SD89_02195) trmB 425845..426480 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SD89_RS02205 (SD89_02205) rimP 426739..427275 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  SD89_RS02210 (SD89_02210) nusA 427450..428607 (+) 1158 WP_023611711.1 transcription termination factor NusA -
  SD89_RS02215 (SD89_02215) rnpM 428623..428919 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=137327 SD89_RS02180 WP_002983379.1 423228..423953(+) (pptA) [Streptococcus pyogenes strain NGAS322]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=137327 SD89_RS02180 WP_002983379.1 423228..423953(+) (pptA) [Streptococcus pyogenes strain NGAS322]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGGATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment