Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SD89_RS01785 | Genome accession | NZ_CP010449 |
| Coordinates | 337299..337790 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain NGAS322 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 332299..342790
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SD89_RS01755 (SD89_01755) | - | 333589..334089 (+) | 501 | WP_015055998.1 | phosphatase PAP2 family protein | - |
| SD89_RS01760 (SD89_01760) | trxA | 334152..334484 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| SD89_RS01765 (SD89_01765) | - | 334536..335123 (-) | 588 | WP_010922631.1 | helix-turn-helix domain-containing protein | - |
| SD89_RS01770 (SD89_01770) | mutY | 335199..336353 (-) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| SD89_RS01775 (SD89_01775) | - | 336521..336814 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| SD89_RS01780 (SD89_01780) | rpsF | 336987..337277 (+) | 291 | WP_053308212.1 | 30S ribosomal protein S6 | - |
| SD89_RS01785 (SD89_01785) | ssb | 337299..337790 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| SD89_RS01790 (SD89_01790) | rpsR | 337955..338194 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| SD89_RS01795 (SD89_01795) | - | 338325..338981 (-) | 657 | WP_002983144.1 | DUF1129 domain-containing protein | - |
| SD89_RS01800 (SD89_01800) | - | 339113..340057 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=137325 SD89_RS01785 WP_002983122.1 337299..337790(+) (ssb) [Streptococcus pyogenes strain NGAS322]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=137325 SD89_RS01785 WP_002983122.1 337299..337790(+) (ssb) [Streptococcus pyogenes strain NGAS322]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGGTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACACCTAACTTTGGAAGAGATGATAGCCCATTTGGCAATTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGGTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACACCTAACTTTGGAAGAGATGATAGCCCATTTGGCAATTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |