Detailed information NTG0137146

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: AOT11_RS08875
• Genome accession: NZ_CP012881
• Coordinates: 1900641..1903463 (-)
• Length: 940 a.a.
• NCBI ID: WP_026050227.1
• Uniprot ID: -
• Organism: Vibrio vulnificus NBRC 15645 = ATCC 27562
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1895641..1908463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOT11_RS08860 (AOT11_15895)	lysC	1895761..1897110 (-)	1350	WP_017420069.1	lysine-sensitive aspartokinase 3	-
AOT11_RS08865 (AOT11_15900)	-	1897625..1898746 (+)	1122	WP_017420068.1	pyridoxal-phosphate-dependent aminotransferase family protein	-
AOT11_RS08870 (AOT11_15905)	-	1898811..1900574 (-)	1764	WP_017420067.1	PglL family O-oligosaccharyltransferase	-
AOT11_RS08875 (AOT11_15910)	uvrA	1900641..1903463 (-)	2823	WP_026050227.1	excinuclease ABC subunit UvrA	Machinery gene
AOT11_RS08880 (AOT11_15915)	galU	1903606..1904478 (-)	873	WP_017420065.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
AOT11_RS08885 (AOT11_15920)	qstR	1904664..1905311 (-)	648	WP_017420064.1	response regulator transcription factor	Regulator
AOT11_RS08890 (AOT11_15925)	ssb	1905611..1906150 (+)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
AOT11_RS08895 (AOT11_15930)	csrD	1906303..1908300 (+)	1998	WP_026050228.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104003.36 Da
• Isoelectric Point: 6.4491

>NTDB_id=137146 AOT11_RS08875 WP_026050227.1 1900641..1903463(-) (uvrA) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
MDKIEVRGARTHNLKNVNLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEHQVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRSDLQQRLAESFETALELSGGIAVIAPMEGD
GEESVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPDRVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHVPFNSLSKRIQEVILKGSGRTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCASCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLDGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKDVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDARDFFD
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=137146 AOT11_RS08875 WP_026050227.1 1900641..1903463(-) (uvrA) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAATGTTAATCTCACTATCCCACGAGATAAGTTGAT
CGTCATTACTGGCTTATCGGGTTCAGGGAAATCTTCTTTGGCCTTTGATACCCTTTACGCTGAAGGTCAACGACGTTATG
TAGAATCCCTGTCAGCCTACGCTCGCCAGTTTCTCTCTTTGATGGAAAAGCCCGATGTTGACCACATTGAAGGCCTCTCG
CCAGCAATTTCTATCGAGCAGAAATCCACCTCACACAACCCGCGTTCAACCGTAGGGACCATCACAGAAGTGTATGACTA
CCTTCGCCTACTGTATGCCCGCGTTGGTGAGCCTCGCTGTCCTGAACATCAAGTCCCTTTAGCCGCTCAAACCATTAGTC
AAATGGTCGACAAAGTTCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATAGTAAAAGAGCGCAAAGGC
GAACACGTTAAAACATTAGAGAACCTTGCTGCTCAAGGTTTTATCCGTGCTCGTATTGACGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTGCGTAGCGATTTAC
AACAAAGACTCGCAGAATCCTTTGAAACGGCACTGGAACTCTCAGGCGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGAAGAGAGCGTTTTTTCCGCCAACTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
TTCGTTCAATAACCCAGCCGGTGCATGTGGTACTTGTGATGGCCTCGGGGTACAACAATATTTTGATCCTGACCGAGTGA
TTCAAGATGCCAATTTAAGTCTTGCGCAAGGGGCGATTCGTGGTTGGGATCAGAAAAACTATTACTATTTCCAAATGCTC
ACATCGCTGGCTGAGCATTACGATTTCGATTTACATGTCCCTTTTAACTCGCTTTCAAAACGCATCCAAGAAGTGATCTT
AAAAGGCTCAGGGCGCACTGAAATCGAATTTAAGTACATCAACGATCGAGGCGACATTCGTCTAAAACGTCATCCATTTG
AAGGCATTCTCAATACACTCGAACGCCGTTATCGCGACACAGAATCTAACTCGGTACGAGAGGAGTTGGTAAAATATATC
TCCACCAAACCTTGCGCCAGTTGTGGCGGAACACGTCTGCGCCTAGAAGCTCGCAATGTGTTTATTAATGACACGACATT
GCCGCAAATCGTCGAGTTGAGTATCGCTGATGCATTGACCTTTTTCGCCACCTTAAAGCTTGACGGGCAGCGAGCTCAAA
TTGCTGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAATGTTGGCCTCAATTATTTGAACTTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCACAGCGTATTCGTCTAGCTAGTCAGATCGGTGCCGGTTTGGTTGGGGT
GATGTATGTGCTCGATGAACCATCAATAGGCCTTCACCAGCGTGACAATGAGCGCTTACTCAAAACACTGACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGACATTGGC
CCTGGCGCTGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTAAGCGGTGCCAAGCAGATTATTGTGCCGACCCAACGCACACCAAGAGATAAGAACAAAACGGTTGAAC
TCATTGGAGCCAGTGGCAACAACCTTAAAGACGTCAATCTTTCAGTGCCTGTCGGGCTATTCAGTTGTATCACCGGGGTT
TCTGGTTCAGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCGCATACTCAACTCAATGGGGCAACCACTGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCACTTCGATAAAGTCATCGATATCGACCAGAGCCCGATAGGTC
GCACACCGCGTTCGAATCCAGCGACCTATACGGGGATTTTCACTCCGATTCGAGAGTTGTTCTCCGGCACCCAAGAGTCT
CGTTCACGTGGCTATAAACCTGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCATTTCCTACCCGATGTGTACGTGCCTTGTGATGTGTGTAAGGGCAAGCGCTACAACCGAGAAA
CGTTAGAAGTCCACTATAAAGGGAAGAGCATTGATGAAGTTCTGGAAATGACGGTGGAAGATGCTCGAGACTTTTTCGAC
CCAGTTCCCGTCATTGCGCGCAAGTTGCAAACCTTAATGGATGTTGGTCTTTCTTATATCCGTTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGGGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGAAAAACCCTTTATA
TTTTGGATGAACCAACGACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTGCGCGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGACTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCTCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

• UvrA interaction domain (UvrA_inter) (130-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.962	100	0.581
uvrA	Streptococcus pneumoniae TIGR4	57.962	100	0.581
uvrA	Streptococcus pneumoniae D39	57.962	100	0.581