Detailed information NTG0137122

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: SE88_RS07865
• Genome accession: NZ_CP010436
• Coordinates: 1605452..1606891 (-)
• Length: 479 a.a.
• NCBI ID: WP_000749005.1
• Uniprot ID: A0AAC8N2R8
• Organism: Helicobacter pylori strain 26695-1MET
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1600452..1611891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE88_RS07840 (SE88_07840)	recG	1601584..1603455 (-)	1872	WP_001158370.1	ATP-dependent DNA helicase RecG	-
SE88_RS07845 (SE88_07845)	-	1603537..1603884 (+)	348	WP_000837022.1	lipoprotein	-
SE88_RS07850 (SE88_07850)	-	1603888..1604523 (+)	636	WP_000765634.1	outer membrane protein	-
SE88_RS07855 (SE88_07855)	-	1604520..1605272 (-)	753	WP_000767556.1	exodeoxyribonuclease III	-
SE88_RS07865 (SE88_07865)	comH	1605452..1606891 (-)	1440	WP_000749005.1	hypothetical protein	Machinery gene
SE88_RS07875 (SE88_07875)	dnaA	1607120..1608493 (-)	1374	WP_000380647.1	chromosomal replication initiator protein DnaA	-
SE88_RS07880 (SE88_07880)	-	1608646..1609188 (+)	543	WP_000923009.1	hypothetical protein	-
SE88_RS07885 (SE88_07885)	-	1609231..1609470 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
SE88_RS07890 (SE88_07890)	glmS	1609471..1611264 (+)	1794	WP_000334435.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54783.74 Da
• Isoelectric Point: 7.0430

>NTDB_id=137122 SE88_RS07865 WP_000749005.1 1605452..1606891(-) (comH) [Helicobacter pylori strain 26695-1MET]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=137122 SE88_RS07865 WP_000749005.1 1605452..1606891(-) (comH) [Helicobacter pylori strain 26695-1MET]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAAAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACAACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAGCAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
GTGAAAACAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
AACTGCAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATTAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAGCCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTATGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	100	100	1