Detailed information NTG0136937

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QR62_RS02530
• Genome accession: NZ_CP012869
• Coordinates: 517199..518224 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain K-12 substr. MG1655_TMP32XR1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 512199..523224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QR62_RS02510 (QR62_02510)	metJ	513260..513577 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QR62_RS02515 (QR62_02515)	yiiX	513761..514369 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QR62_RS02520 (QR62_02520)	rpmE	514430..514642 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QR62_RS02525 (QR62_02525)	priA	514845..517043 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
QR62_RS02530 (QR62_02530)	cytR	517199..518224 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QR62_RS02535 (QR62_02535)	ftsN	518316..519275 (+)	960	WP_000068828.1	cell division protein FtsN	-
QR62_RS02540 (QR62_02540)	hslV	519368..519898 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QR62_RS02545 (QR62_02545)	hslU	519908..521239 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QR62_RS02550 (QR62_02550)	menA	521306..522232 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QR62_RS02555 (QR62_02555)	rraA	522325..522810 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QR62_RS02560 (QR62_02560)	zapB	522895..523140 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=136937 QR62_RS02530 WP_000644904.1 517199..518224(+) (cytR) [Escherichia coli strain K-12 substr. MG1655_TMP32XR1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=136937 QR62_RS02530 WP_000644904.1 517199..518224(+) (cytR) [Escherichia coli strain K-12 substr. MG1655_TMP32XR1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628