Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | QQ24_RS22365 | Genome accession | NZ_CP012868 |
| Coordinates | 4524117..4524557 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli str. K-12 substr. MG1655 strain K-12 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4519117..4529557
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQ24_RS22340 (QQ24_22340) | aroP | 4520115..4521488 (+) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
| QQ24_RS22345 (QQ24_22345) | ampE | 4521531..4522385 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| QQ24_RS22350 (QQ24_22350) | ampD | 4522382..4522933 (-) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| QQ24_RS22355 (QQ24_22355) | nadC | 4523021..4523914 (+) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| QQ24_RS22365 (QQ24_22365) | pilA | 4524117..4524557 (+) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| QQ24_RS22370 (QQ24_22370) | pilB | 4524567..4525952 (+) | 1386 | WP_001025145.1 | type II secretion system protein GspE | Machinery gene |
| QQ24_RS22375 (QQ24_22375) | hofC | 4525942..4527144 (+) | 1203 | WP_000157266.1 | protein transport protein HofC | - |
| QQ24_RS22380 (QQ24_22380) | guaC | 4527179..4528222 (-) | 1044 | WP_001217338.1 | GMP reductase | - |
| QQ24_RS26070 | - | 4528378..4528422 (-) | 45 | WP_120795372.1 | protein YacM | - |
| QQ24_RS22385 (QQ24_22385) | coaE | 4528447..4529067 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=136925 QQ24_RS22365 WP_000360904.1 4524117..4524557(+) (pilA) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=136925 QQ24_RS22365 WP_000360904.1 4524117..4524557(+) (pilA) [Escherichia coli str. K-12 substr. MG1655 strain K-12]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |