NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	AOY38_RS10350	Genome accession	NZ_CP012832
Coordinates	2192296..2194992 (+)	Length	898 a.a.
NCBI ID	WP_010873183.1	Uniprot ID	-
Organism	Synechocystis sp. PCC 6803 substr. GT-G
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2187296..2199992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOY38_RS17680	-	2188594..2188831 (-)	238	Protein_2056	hypothetical protein	-
AOY38_RS10325 (AOY38_10315)	-	2188824..2189942 (-)	1119	WP_010873179.1	branched-chain amino acid ABC transporter permease	-
AOY38_RS10330 (AOY38_10320)	frr	2190024..2190572 (-)	549	WP_010873180.1	ribosome recycling factor	-
AOY38_RS10335 (AOY38_10325)	pyrH	2190559..2191281 (-)	723	WP_010873181.1	UMP kinase	-
AOY38_RS10340 (AOY38_10330)	-	2191482..2191703 (-)	222	WP_010873182.1	type II toxin-antitoxin system HicB family antitoxin	-
AOY38_RS10345 (AOY38_10335)	-	2191704..2192048 (-)	345	WP_020862242.1	type II toxin-antitoxin system HicA family toxin	-
AOY38_RS10350 (AOY38_10340)	clpC	2192296..2194992 (+)	2697	WP_010873183.1	ATP-dependent chaperone ClpB	Regulator
AOY38_RS10355 (AOY38_10345)	-	2195023..2195511 (+)	489	WP_010873184.1	hypothetical protein	-
AOY38_RS10360 (AOY38_10350)	-	2195623..2198850 (-)	3228	WP_010873185.1	efflux RND transporter permease subunit	-

Sequence

Protein

Download Length: 898 a.a. Molecular weight: 101391.58 Da Isoelectric Point: 4.9868

                                >NTDB_id=136818 AOY38_RS10350 WP_010873183.1 2192296..2194992(+) (clpC) [Synechocystis sp. PCC 6803 substr. GT-G]

MQPTDPTKFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLRQQLEIFTNRQPKQAYV

EQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGFAEDDRVGRKTLRAFNLDPQDLELAIKAIRGSQKVTEPNQEEKY

EALDKYGRDLTEQARQGKLDPVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLKNRQLI

SLDMGSLIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLLKPMLARGELRCIGATTL

DEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRGLKEKYEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDE

AAARLKMEITSKPVELEDIDRRLMQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQML

EEINTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNTLLREQVTESDIAEIVAGWTG

IPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDS

EEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGR

VVDFRNTIIVMTSNIGSDHILSLSADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLIIFHTLKRDELRRIVVLQIKRIEK

LLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAIQRQLENPIATKILENTFVAGDKILIDCVDGQLIFDKEIEPTTL

PEEPEENITAVEVEVLSS

Nucleotide

Download Length: 2697 bp

                                >NTDB_id=136818 AOY38_RS10350 WP_010873183.1 2192296..2194992(+) (clpC) [Synechocystis sp. PCC 6803 substr. GT-G]

ATGCAACCTACTGATCCAACCAAATTTACTGAACAAGCCTGGGACGCCATTGTTAAATCCCAAGAAGTAGCCCGTCGTTA

TAAGAACACAAATTTGGAAGTAGAGCATATTCTGCTGGCGTTGTTGGAGCAGGATATGGGTTTGGCGGCAAGGATTTTCC

AGCGGGCGGCGGTGGATGGCGAGGGACTACGGCAACAGTTGGAAATTTTCACCAACCGGCAACCCAAGCAGGCTTATGTA

GAACAACTTTACCTGGGGCGTAGTTTGGATGTGATGCTAGACCGGGCCGATGCCGCCCGTAGTAGCTGGGAAGATAAATT

CATTTCCGTTGAACATTTACTGGTGGGGTTTGCAGAGGACGACCGGGTGGGGCGCAAAACCCTCCGCGCGTTTAACCTTG

ACCCCCAGGATTTAGAGTTGGCCATCAAAGCGATTCGAGGTTCCCAAAAGGTGACGGAGCCAAATCAAGAAGAAAAATAT

GAAGCGTTGGATAAATACGGACGAGATCTGACGGAGCAGGCCCGCCAGGGTAAGCTAGACCCAGTGATCGGTCGAGATGA

GGAAATTCGTCGAGTTATTCAAGTACTCTCTCGGCGTTCCAAAAATAACCCTGTCCTGATCGGTGAACCGGGGGTGGGCA

AAACGGCGATCGCCGAAGGTTTGGCCCAACGGATTATCAATGGCGACGTACCAGAATCATTAAAAAATCGGCAGTTAATT

TCCCTGGATATGGGCAGTTTAATTGCCGGGGCTAAATATCGGGGGGAATTTGAAGAAAGACTGCGGTCAGTGATGAAGGA

AGTGACCAATTCCGATGGGCAAATCATCTTATTCATTGATGAAGTCCATACCGTAGTGGGAGCCGGTGGTCGCGAAGGTT

CTGGGTCCATGGATGCAGGGAATTTGCTCAAGCCCATGTTAGCCCGGGGGGAGCTGCGGTGCATTGGGGCCACCACATTG

GATGAATACCGCAAAAACATCGAAAAAGATCCTGCTTTAGAAAGAAGATTTCAACAGGTTTACGTCAAGCAACCTAGCGT

GGATGATACGATTTCCATCCTGCGGGGTTTGAAGGAAAAATATGAAGTACACCATGGGGTCAAAATCACCGACTCCGCCC

TAGTAGCAGCAGCTACCCTTTCCCATCGCTATATCCAAGATCGATTTTTGCCCGACAAGGCGATTGATTTAGTGGACGAA

GCAGCCGCCCGATTAAAAATGGAAATTACTTCCAAACCGGTGGAATTAGAGGATATTGACCGACGCTTAATGCAACTACA

AATGGAAAAACTTTCCCTAGAAGGGGAAGAAAAACGTCCTGGTTTAGGAGCTGACAAATCTTCCAAAGAAAGACTAGAAA

AAATTCAGCAGGAAATTACTGAATTAGAGGGTCAGCAACAGGAATTATCCGGTCAATGGCTGTCGGAAAAACAGATGCTG

GAAGAAATTAACACCCTCAAAGAAAAGGAGCAAGAGCTAAGACTTCAGGTAGAAAAAGCTGAGCGGGCCACTGATTGGGA

AAAGGCCGCCAAAATTAAGTACGGAGAGTTAGAAGTCCTCCAACATGACATTGAAGAAAAAGAAAGTAAATTACTAGAAA

TTCAAGGCTCCGGTAATACTCTTTTGCGGGAACAGGTAACGGAATCGGACATTGCCGAAATTGTCGCCGGTTGGACGGGC

ATCCCCATGAACCGTCTCATGGAAACGGAACGGCAAAAATTATTGCAATTGGAAGGTCACCTCCATCAGCGAGTGATCGG

TCAGAAGGAGGCAGTAGCGGCAGTTTCTGCGGCCATACGTCGGGCTAGGGCCGGCATGAAGGACCCCAGTCGCCCCATTG

GCTCTTTTCTGTTTATGGGGCCCACGGGGGTAGGTAAAACGGAATTGGCTCGGGCCTTGGCCGGGTTTCTGTTTGACAGC

GAAGAAGCCATGGTGCGGATTGATATGTCCGAATATATGGAAAAACACGCCGTTTCCCGTTTAATTGGAGCTCCCCCCGG

TTACGTGGGCTACGAGGAAGGGGGACAATTATCGGAAGCAGTGCGCCGTCGTCCCTATTCCGTTGTGTTGTTGGACGAAG

TGGAAAAAGCCCATTTAGACGTGTTTAATATTTTGCTGCAGGTCTTGGATGATGGCCGCATTACCGATTCCCAGGGGCGG

GTGGTGGATTTTCGCAACACCATTATCGTCATGACCAGTAACATTGGCAGTGACCATATTCTCAGCCTTTCCGCCGATGA

TGCCGACTACGACAAAATGCAGAAACAGGTATTACAATCCCTGCGCAAACATTTCCGTCCGGAATTTCTCAACCGTATTG

ATGATCTAATTATTTTCCATACGTTGAAACGGGATGAGTTGCGTCGCATTGTCGTCCTACAAATTAAACGCATCGAGAAG

TTATTAGACGAGCAAAAAATCACGCTTTCTCTTTCCGATGCTGCCCTGGATCACATCGTCAGTGCTGGTTACGATCCCAC

CTACGGAGCAAGACCTTTAAAACGTGCTATTCAACGACAGTTGGAAAATCCTATTGCCACTAAAATCTTAGAAAATACTT

TCGTTGCAGGGGACAAAATTCTCATTGATTGTGTGGATGGTCAGTTAATCTTTGATAAAGAAATAGAGCCCACAACATTA

CCAGAAGAGCCAGAAGAAAATATCACAGCGGTGGAAGTCGAGGTTCTTTCTTCATAA