Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | RU84_RS17055 | Genome accession | NZ_CP010397 |
| Coordinates | 3616393..3616719 (-) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain 6200 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3611393..3621719
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RU84_RS17035 (RU84_17035) | - | 3611493..3612122 (-) | 630 | WP_032050430.1 | FHA domain-containing protein | - |
| RU84_RS17040 (RU84_17040) | gspD | 3612163..3614439 (-) | 2277 | WP_032050431.1 | type II secretion system secretin GspD | - |
| RU84_RS17045 (RU84_17045) | - | 3614481..3615317 (-) | 837 | WP_000870031.1 | type II secretion system protein N | - |
| RU84_RS17050 (RU84_17050) | gspN | 3615317..3616060 (-) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| RU84_RS17055 (RU84_17055) | hns | 3616393..3616719 (-) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| RU84_RS17060 (RU84_17060) | - | 3616914..3617354 (-) | 441 | WP_000661569.1 | acyl-CoA thioesterase | - |
| RU84_RS17065 (RU84_17065) | - | 3617362..3618555 (-) | 1194 | WP_000681780.1 | membrane protein | - |
| RU84_RS17070 (RU84_17070) | - | 3618565..3619404 (-) | 840 | WP_029424458.1 | hypothetical protein | - |
| RU84_RS17075 (RU84_17075) | - | 3619413..3620180 (-) | 768 | WP_000897417.1 | uroporphyrinogen-III synthase | - |
| RU84_RS17080 (RU84_17080) | hemC | 3620185..3621102 (-) | 918 | WP_002159654.1 | hydroxymethylbilane synthase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=136792 RU84_RS17055 WP_000801427.1 3616393..3616719(-) (hns) [Acinetobacter baumannii strain 6200]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=136792 RU84_RS17055 WP_000801427.1 3616393..3616719(-) (hns) [Acinetobacter baumannii strain 6200]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |