Detailed information NTG0136776

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RU84_RS09375
• Genome accession: NZ_CP010397
• Coordinates: 2026382..2027083 (-)
• Length: 233 a.a.
• NCBI ID: WP_039244803.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 6200
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2021382..2032083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RU84_RS09345 (RU84_09345)	-	2021687..2022130 (-)	444	WP_001246675.1	SRPBCC family protein	-
RU84_RS09350 (RU84_09350)	tadA	2022200..2022704 (-)	505	Protein_1842	tRNA adenosine(34) deaminase TadA	-
RU84_RS09355 (RU84_09355)	-	2022711..2023835 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RU84_RS09360 (RU84_09360)	ung	2023832..2024545 (-)	714	WP_029424376.1	uracil-DNA glycosylase	-
RU84_RS09365 (RU84_09365)	-	2024596..2025192 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
RU84_RS09370 (RU84_09370)	gspK	2025423..2026382 (-)	960	WP_029424377.1	type II secretion system minor pseudopilin GspK	-
RU84_RS09375 (RU84_09375)	xcpW	2026382..2027083 (-)	702	WP_039244803.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RU84_RS09380 (RU84_09380)	xcpV	2027083..2027463 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
RU84_RS09385 (RU84_09385)	-	2027453..2028007 (-)	555	WP_005128793.1	type II secretion system protein	-
RU84_RS09390 (RU84_09390)	-	2028017..2028625 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RU84_RS09395 (RU84_09395)	-	2028663..2029436 (-)	774	WP_000497295.1	TatD family hydrolase	-
RU84_RS09400 (RU84_09400)	-	2029454..2029795 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
RU84_RS09405 (RU84_09405)	-	2029807..2030787 (-)	981	WP_001075409.1	DNA polymerase III subunit delta'	-
RU84_RS09410 (RU84_09410)	kdsB	2030799..2031560 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26653.61 Da
• Isoelectric Point: 9.3468

>NTDB_id=136776 RU84_RS09375 WP_039244803.1 2026382..2027083(-) (xcpW) [Acinetobacter baumannii strain 6200]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTLAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=136776 RU84_RS09375 WP_039244803.1 2026382..2027083(-) (xcpW) [Acinetobacter baumannii strain 6200]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACACTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991