Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   RU84_RS03395 Genome accession   NZ_CP010397
Coordinates   694332..698852 (+) Length   1506 a.a.
NCBI ID   WP_032049810.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 6200     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 689332..703852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RU84_RS03370 (RU84_03370) - 689773..690411 (-) 639 WP_032009406.1 hypothetical protein -
  RU84_RS03375 (RU84_03375) pilG 690694..691077 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  RU84_RS03380 (RU84_03380) - 691101..691463 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  RU84_RS03385 (RU84_03385) - 691524..692060 (+) 537 WP_000729762.1 chemotaxis protein CheW -
  RU84_RS03390 (RU84_03390) - 692107..694185 (+) 2079 WP_000505929.1 methyl-accepting chemotaxis protein -
  RU84_RS03395 (RU84_03395) chpA 694332..698852 (+) 4521 WP_032049810.1 Hpt domain-containing protein Regulator
  RU84_RS03400 (RU84_03400) - 698849..699313 (+) 465 WP_000678924.1 hypothetical protein -
  RU84_RS03405 (RU84_03405) - 699551..700960 (+) 1410 WP_224355846.1 coproporphyrinogen-III oxidase family protein -
  RU84_RS03410 (RU84_03410) - 700968..701849 (+) 882 WP_000022127.1 alpha/beta fold hydrolase -
  RU84_RS03415 (RU84_03415) dapE 701987..703120 (-) 1134 WP_001016577.1 succinyl-diaminopimelate desuccinylase -
  RU84_RS03420 (RU84_03420) - 703246..703389 (-) 144 WP_001984826.1 entericidin A/B family lipoprotein -

Sequence


Protein


Download         Length: 1506 a.a.        Molecular weight: 171621.87 Da        Isoelectric Point: 4.3223

>NTDB_id=136773 RU84_RS03395 WP_032049810.1 694332..698852(+) (chpA) [Acinetobacter baumannii strain 6200]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFIEEIEEIFVDLQPLINKWMQSENIAKLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLQLTPTIQSYVQLVFKFYFLKLVDNFKQKRAHTLDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETVTGLELDYIEQDSLAEPIIQATHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSSEQLEARLQQFNQSWDAYVEQ
HGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEV
LLDKPALLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGVVKQHQSILEELKLYTQYIPDLSNDLSQQDSTSFEPISNIEP
EPEVVATVENFSDSADWAVLGQSVQQDRQYISSTQVNRNFDADLLDIFLEEAEELLEVIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGLIAHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPVSVVEAFDAESEVFSEQEVISEIIIDEIPVELEPALAKLETHHDQVFDTAVTELATPVEVITSVTSQENEVA
ADEQDIDAVVEQTFLEEAIELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVQAIAYQLENAFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLENIQFFETTIQIPTKLTRADLFSSEPVMTFIQGDGTEPPPMM
GAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVIPLEHMLRNAIDHGLEDRAQRQQANKPETGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVES
VYGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIIRVSPASLEQYFESPQELFEYENKRYPLRYLSEFVGNQP
IPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQST
QRHKQLSEAIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVASDSEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=136773 RU84_RS03395 WP_032049810.1 694332..698852(+) (chpA) [Acinetobacter baumannii strain 6200]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATCTTCATTGAAGAAATTGAAGAGATTTTTGTTGATTTGCAACCTTTGATAAATAAATGGATGCAGTCTGAGAATA
TTGCTAAGCTCACTGAAATTCGTCGTCATTTCCATACCTTAAAAGGTTCCGGAAGAATGATTGGCGCTAAATCTTCAGCT
GAGCTTGCGTGGACAGTCGAAGATACACTCAACCGGGTAATCAACCAAAGCTTACAATTAACGCCAACTATCCAGAGCTA
TGTGCAGTTAGTATTTAAGTTCTATTTCCTTAAATTAGTAGATAATTTTAAGCAAAAAAGAGCACATACCTTAGATTTCA
GACCTCTTATTTTATTAGGTCAACAACTACAACAACAGCAAAGTTTAGAACCAGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACGGCCGAAACAGTGACTGGTCTTGAGCTAGATTATATTGAACAAGATTCGTTAGCCGAGCCAATCATTCA
AGCTACTCATACTGAAATTGAAATAAATCTAGATGAAACTTTGACCTTATTTATGGAAGAGGCAGAAGAACATTTAGCCA
CGATTCATCAATTTTTGGATCAAGAGTTACATCAGTACGACAGTTATAACGCTTTAATCCGCGCTTTACATACTTTGCGT
GGTAGTTCTGCAATGGCGCAGGTCGAAACAATTTTCGAGGCCAGTACCAAAGTTGAGCATTTATTTAAAATACTGCTGCA
AGAAGAGTTATCTTCTCACTCTGAAGAAATTTTATTATTACAAGAATATCGTGAGTTTGTTCGAGATAGCTTGGAACTAC
TATCTAGATATAGTTCAAGTGAACAGCTCGAAGCGAGATTGCAGCAATTTAATCAATCTTGGGATGCATATGTTGAGCAA
CATGGTGACCGAACAGATCCGTTAATGCCTTCTCATGGTTTGGTATCGCAATTATTACAATTAGATGTTTCTGAATTATT
GGATGCAGAATTAGATTTTGAGAAGGGTATTCGTAATGAGTTTCCTGATTATCTTGAACGCCTAAGTGAACAGGCTGATT
TATTACTGCAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGCCAACTGAAAGAAAGTTATGAAGTG
CTGCTTGATAAACCTGCGTTATTACAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTCATTCAATT
ATTTGATGCTTTAGCTGCTGGTCAGCGAGTCGGTGTTGTTAAGCAACATCAAAGTATTTTAGAAGAATTAAAACTTTATA
CGCAATACATTCCAGACCTATCAAATGACCTGTCTCAGCAGGATTCGACATCTTTTGAACCAATATCCAATATTGAACCA
GAGCCAGAAGTAGTAGCTACTGTAGAGAATTTCTCAGACTCTGCAGACTGGGCGGTATTAGGTCAAAGTGTGCAGCAAGA
TCGACAATATATTTCATCTACACAAGTGAATCGAAATTTTGATGCTGATCTTTTAGATATCTTTCTTGAGGAAGCTGAAG
AATTACTTGAGGTAATTGATACCGATCTTAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAACCTAATG
CGTTATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCAACGTATCTTGGTTTGATTGCCCATGAATTAGAAAG
CATTTATGAGCGTTTAATTCAAAAGCAATTAGTAGCAACTTCAGATTTAATTGATTTTATTCGTTTGGTTCAAGATGACT
TGGCTGATCGTTTACAAATCATGCGTGAACAACAACTAGATTATGCAGCTCCTTACACAATTAACGCATTAAAACGAGCG
GGTCAAAACTCTAACTTCCAACCTGTATCAGTGGTTGAGGCATTTGATGCTGAAAGTGAGGTATTCTCTGAGCAAGAGGT
GATATCTGAAATAATAATAGATGAGATACCAGTAGAACTTGAACCTGCTCTTGCAAAGCTAGAAACTCATCACGATCAGG
TATTCGATACAGCGGTTACCGAGTTAGCTACTCCAGTTGAAGTAATTACCTCGGTTACATCGCAAGAGAATGAAGTTGCA
GCTGATGAGCAGGACATTGATGCTGTTGTTGAACAGACCTTCCTAGAAGAAGCTATTGAATTGTTAGAAATGGCTGAGTC
GCTATTAAAACAATGGTTTGAACAGCGTACAAACCGTAGTATTTTGCTTCAGCTACAAAGAGCCGTGCACAGTTTGAAAG
GTGGTGCACGAATGGTGGGTTTAGAAGCCGTACAAGCAATTGCCTACCAACTAGAAAATGCTTTTGAACAATTTGCGTTG
CATCACTTCAATTCAAATATTTATGATCATTTATTAGAAAGTGCAATTGCATGGTTAAAAGATGCAATTTTTAACCACAA
CTATCAGCATTTCGATGGATTACAGCAAAGTTTAGAAAATATTCAATTCTTTGAAACTACAATCCAGATTCCGACTAAGT
TAACTAGAGCGGACTTGTTTAGCTCAGAACCAGTGATGACCTTTATACAAGGTGATGGTACAGAGCCTCCACCAATGATG
GGAGCATGGGAGCAAACAGAGCGTCTGGATCAGAATAATGAAATGATCCGTGTTTCAGCCGACTTAATCGAGAAAATGAT
TGATTTGTCTGGTGAAAACTCCATTAACCGTTCACGAATTGAAATGGACCTAAGCCAGTTTAGCCATACACTAGTTGAAA
TGGAGTTGGCGATTCAACGACTTGCCGATCAGTTACGACGAATGGAAGGTGAGTTAGAAACACAGATTATTGCTAAACAT
GGAATTGAACATTCTCGTTATACTGACTTTGACCCATTAGAGATGGACCAATATTCATCTTTAAATCAATTGTCGAAATC
GCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTGACAAGATCAGAGATACCGAAAGTTTGCTTT
TACAACAATCACGAATTCAAGCGGAAATTCAAGAAGGTTTAATGCGGACACGGTTGGTTCCATTTTCGCGTTTATTGCCG
CGTTTACAACGAATTGTTCGTCAGACGTCTACAGCATTGAATAGACCTGCTGAGCTTTTCGTAAATAATACGGAAGGTGA
GTTGGACCGCAACATTTTAGAACGGTTAGTGATTCCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGTTTAGAAG
ACCGAGCGCAGCGGCAACAAGCAAATAAACCAGAAACAGGGCGTATTGAGCTTAATATTCAGCGTCAAGGTACGGATGTT
GTGGTTGTCTTTAGTGATGATGGTCAAGGTATTGATGTTGAAAAAGTACGTCAGAAAGCCCTCCTTGCCGGATTGATCAA
GCCAGAACAAGACTTAGAACAGCAAGACATACTGCAACTCATTTTCCATCCGGGTTTAAGTACAGCAGAGCAAGTCACTC
AGATTTCCGGGCGTGGTGTAGGTCTTGATGTCGTGCAGAGTGATATTAAGTCTTTGGGGGGACATGTCAGCGTTGAATCC
GTCTATGGGCAGGGAACAACATTTACGATTCGCGTACCGACTACAGTAGCGGTAAGTGATGCCTTAATGGTTAAAGTGGC
AGATCAACAATTTGCGATTCCACTTGCTCAAATCGATCGAATTATTCGAGTATCACCAGCCTCTTTAGAGCAGTATTTTG
AAAGTCCTCAAGAACTATTTGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTTGGCAACCAACCC
ATACCACGTCTAAATGGCGTGATGTATTCATTACCTGTGTTAATGATTAAAGCCAATAATGGCCAAACTGTGGCACTACT
TGTTGACCAGTTAATTGGCTCTCGAGCACAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGAGCAATTG
CAGGCGCCACAATTTTAGGTGATGGACAGGTCTGCTTAATTTTAGACGGACAAAATATTGCGCGACAAATTCAGTCAACT
CAGCGTCATAAACAACTTAGTGAAGCAATATATAGACAACGAGAGTCTGATGAACGCCGTCTCATCATGATTGTAGATGA
CTCAGTAACTGTGCGTAAGGTCACTTCCCGATTACTTGAACGCCAAGGCTATGATGTGGTTACGGCTAAAGATGGTGTTG
ACGCCATAGAGCAGCTAGAAAATATTAAGCCAGATTTGATGCTACTTGATATTGAAATGCCACGTATGGATGGTTTTGAG
GTTCTCAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGCGAAAAACA
TCGTGAACGAGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAGGAAGAAGAGTTACTAGAGAATATCG
ATGCTTTACTTGTAGCGTCTGACAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

98.473

100

0.985


Multiple sequence alignment