Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | RU84_RS01440 | Genome accession | NZ_CP010397 |
| Coordinates | 310749..311390 (+) | Length | 213 a.a. |
| NCBI ID | WP_000201227.1 | Uniprot ID | A0A009HSE6 |
| Organism | Acinetobacter baumannii strain 6200 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 305749..316390
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RU84_RS01420 (RU84_01420) | - | 305797..306129 (+) | 333 | WP_000169602.1 | hypothetical protein | - |
| RU84_RS01425 (RU84_01425) | - | 306132..306956 (+) | 825 | WP_086221410.1 | putative RNA methyltransferase | - |
| RU84_RS01430 (RU84_01430) | ponA | 306974..309529 (-) | 2556 | WP_000736677.1 | penicillin-binding protein PBP1a | - |
| RU84_RS01435 (RU84_01435) | pilM | 309691..310749 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| RU84_RS01440 (RU84_01440) | pilN | 310749..311390 (+) | 642 | WP_000201227.1 | PilN domain-containing protein | Machinery gene |
| RU84_RS01445 (RU84_01445) | pilO | 311387..312127 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| RU84_RS01450 (RU84_01450) | pilP | 312138..312665 (+) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| RU84_RS01455 (RU84_01455) | pilQ | 312733..314898 (+) | 2166 | WP_032050295.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| RU84_RS01460 (RU84_01460) | aroK | 314910..315479 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 24019.35 Da Isoelectric Point: 5.3968
>NTDB_id=136756 RU84_RS01440 WP_000201227.1 310749..311390(+) (pilN) [Acinetobacter baumannii strain 6200]
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=136756 RU84_RS01440 WP_000201227.1 310749..311390(+) (pilN) [Acinetobacter baumannii strain 6200]
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAAAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCTGCTAAAT
GA
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAAAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCTGCTAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comN | Acinetobacter baylyi ADP1 |
71.905 |
98.592 |
0.709 |