Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SanJ4211_RS02670 Genome accession   NZ_CP012805
Coordinates   518043..518729 (+) Length   228 a.a.
NCBI ID   WP_021001414.1    Uniprot ID   -
Organism   Streptococcus anginosus strain J4211     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 513043..523729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS02655 (SanJ4211_0503c) - 513958..514218 (-) 261 WP_021001411.1 SemiSWEET family transporter -
  SanJ4211_RS02660 (SanJ4211_0504) metG 514464..516458 (+) 1995 WP_021001412.1 methionine--tRNA ligase -
  SanJ4211_RS02665 (SanJ4211_0505c) - 516768..517949 (-) 1182 WP_021001413.1 DUF2974 domain-containing protein -
  SanJ4211_RS02670 (SanJ4211_0506) braR 518043..518729 (+) 687 WP_021001414.1 response regulator transcription factor Regulator
  SanJ4211_RS02675 (SanJ4211_0507) - 518713..519693 (+) 981 WP_021001415.1 sensor histidine kinase -
  SanJ4211_RS02680 (SanJ4211_0508) - 519816..520574 (+) 759 WP_021001416.1 TraX family protein -
  SanJ4211_RS10270 (SanJ4211_0509) - 520636..520764 (+) 129 WP_003031478.1 hypothetical protein -
  SanJ4211_RS02685 (SanJ4211_0510) - 520779..521558 (+) 780 WP_021001418.1 ABC transporter ATP-binding protein -
  SanJ4211_RS02690 (SanJ4211_0511) - 521539..523518 (+) 1980 WP_021001419.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26230.43 Da        Isoelectric Point: 4.8810

>NTDB_id=136504 SanJ4211_RS02670 WP_021001414.1 518043..518729(+) (braR) [Streptococcus anginosus strain J4211]
MHKILLVEDDAVIRQQVKKMLEQWGFEVVSVEDFMQVLTIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYEGEVITLTKNEFQIL
RVLFEHSGSIVARDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEAGLKNFIETKKGIGYGLTNGSSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=136504 SanJ4211_RS02670 WP_021001414.1 518043..518729(+) (braR) [Streptococcus anginosus strain J4211]
ATGCACAAGATATTATTAGTAGAAGACGATGCTGTCATTCGCCAACAAGTCAAAAAAATGCTGGAGCAATGGGGATTTGA
AGTGGTTTCAGTAGAGGATTTCATGCAGGTTTTGACGATTTTTGTCAAGGAAGAGCCGCATCTAGTGCTAATGGACATCG
GTTTACCTCTCTTTAATGGATACCACTGGTGTCAAGAAATTCGCAAGATTTCTAAAGTGCCCATTATGTTTTTGTCATCA
AGAGACCAAGCAATGGATATCGTTATGGCAATCAATATGGGTGGTGATGACTTTGTCACAAAACCGTTTGATAACAATGT
TCTCCTCGCTAAAGTGCAAGGGCTGTTGCGGCGGTCTTACGAGTTTGGTACGGATCAAAGTCTGCTAGAGTATCATGGTG
TGATTCTCAACCTAAAATCTATGGATATGATGTATGAGGGAGAAGTGATTACACTGACAAAAAATGAATTTCAGATTTTA
CGCGTGCTGTTTGAGCATTCTGGTAGCATTGTTGCGCGTGATGATTTGATGAAAGAGCTCTGGAATAGTGATTTCTTTAT
TGATGACAATACCTTGTCAGTTAATGTGGCACGGTTGCGGAAAAAATTAGAAGAAGCAGGGCTCAAAAATTTCATTGAAA
CAAAGAAAGGTATAGGCTACGGATTGACCAATGGATCATCAGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.083

95.614

0.469