Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   BF24_RS10515 Genome accession   NZ_CP010322
Coordinates   1725897..1726691 (-) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus anthracis strain Canadian Bison isolate A0369     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 1720897..1731691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BF24_RS10495 (BF24_1842) - 1722698..1722931 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  BF24_RS10500 (BF24_1843) - 1722980..1723708 (-) 729 WP_000172562.1 glycerophosphodiester phosphodiesterase -
  BF24_RS10505 (BF24_1844) - 1723759..1723905 (+) 147 WP_001247671.1 YycC family protein -
  BF24_RS10510 (BF24_1845) - 1724073..1725599 (-) 1527 WP_000218387.1 glycosyltransferase family 39 protein -
  BF24_RS10515 (BF24_1846) spo0A 1725897..1726691 (-) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  BF24_RS10520 (BF24_1847) spoIVB 1726979..1728277 (-) 1299 WP_002037056.1 SpoIVB peptidase -
  BF24_RS10525 (BF24_1848) recN 1728396..1730135 (-) 1740 WP_000947756.1 DNA repair protein RecN Machinery gene
  BF24_RS10530 (BF24_1849) argR 1730403..1730852 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=136398 BF24_RS10515 WP_003161566.1 1725897..1726691(-) (spo0A) [Bacillus anthracis strain Canadian Bison isolate A0369]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=136398 BF24_RS10515 WP_003161566.1 1725897..1726691(-) (spo0A) [Bacillus anthracis strain Canadian Bison isolate A0369]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAAAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCAAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCCGAGTTTATTGCAATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P52928

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818


Multiple sequence alignment