Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACH32_RS02450 Genome accession   NZ_CP012756
Coordinates   460610..461428 (-) Length   272 a.a.
NCBI ID   WP_001124426.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JS395     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 455610..466428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH32_RS02425 (ACH32_02415) - 456703..457680 (+) 978 WP_000379095.1 metal-dependent hydrolase -
  ACH32_RS02435 (ACH32_02425) - 457941..458777 (-) 837 WP_000886475.1 hypothetical protein -
  ACH32_RS02440 (ACH32_02430) - 458786..460303 (-) 1518 WP_000535841.1 ABC transporter ATP-binding protein -
  ACH32_RS02445 (ACH32_02435) - 460318..460632 (-) 315 WP_000435806.1 YfhH family protein -
  ACH32_RS02450 (ACH32_02440) recX 460610..461428 (-) 819 WP_001124426.1 recombination regulator RecX Regulator
  ACH32_RS02455 (ACH32_02445) sgtB 461689..462498 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  ACH32_RS02460 (ACH32_02450) - 462838..463353 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  ACH32_RS02465 (ACH32_02455) - 463483..463644 (-) 162 WP_001005407.1 SE1561 family protein -
  ACH32_RS02470 (ACH32_02460) yfkAB 463868..465019 (+) 1152 WP_001089606.1 radical SAM/CxCxxxxC motif protein YfkAB -
  ACH32_RS02475 (ACH32_02465) - 465276..465806 (-) 531 WP_000184379.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32293.12 Da        Isoelectric Point: 5.9211

>NTDB_id=136325 ACH32_RS02450 WP_001124426.1 460610..461428(-) (recX) [Staphylococcus aureus strain JS395]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
LQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTEFYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=136325 ACH32_RS02450 WP_001124426.1 460610..461428(-) (recX) [Staphylococcus aureus strain JS395]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGAATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
TTACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAATTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.897

100

0.989