Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   RP72_RS23625 Genome accession   NZ_CP010314
Coordinates   390878..391018 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 385878..396018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RP72_RS23620 srfAB 387811..390786 (+) 2976 Protein_353 surfactin non-ribosomal peptide synthetase SrfAB -
  RP72_RS23625 comS 390878..391018 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=136317 RP72_RS23625 WP_010886404.1 390878..391018(+) (comS) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=136317 RP72_RS23625 WP_010886404.1 390878..391018(+) (comS) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment