Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   RP72_RS07825 Genome accession   NZ_CP010314
Coordinates   1473279..1473854 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1468279..1478854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RP72_RS07795 (RP72_07795) dapD 1468465..1469175 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  RP72_RS07800 (RP72_07800) dapI 1469245..1470369 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  RP72_RS07805 (RP72_07805) ykuS 1470431..1470676 (+) 246 WP_003232382.1 YkuS family protein -
  RP72_RS07810 (RP72_07810) mscT 1470713..1471516 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  RP72_RS07815 (RP72_07815) ahpA 1471753..1472295 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  RP72_RS07820 (RP72_07820) ykuV 1472367..1472813 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  RP72_RS07825 (RP72_07825) rok 1473279..1473854 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  RP72_RS07830 (RP72_07830) cse15 1473895..1474860 (-) 966 WP_003245018.1 spore protein Cse15 -
  RP72_RS07835 (RP72_07835) mobA 1474997..1475596 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  RP72_RS07840 (RP72_07840) moeB 1475647..1476666 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  RP72_RS07845 (RP72_07845) glp 1476684..1477976 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  RP72_RS07850 (RP72_07850) mobB 1477937..1478458 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=136268 RP72_RS07825 WP_003232378.1 1473279..1473854(+) (rok) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=136268 RP72_RS07825 WP_003232378.1 1473279..1473854(+) (rok) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment