Detailed information
Bioinformatically predicted
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | RP72_RS02000 | Genome accession | NZ_CP010314 |
| Coordinates | 371728..372126 (-) | Length | 132 a.a. |
| NCBI ID | WP_003246342.1 | Uniprot ID | A0AAE2SGH7 |
| Organism | Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet) | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 366728..377126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RP72_RS01970 (RP72_01970) | yckA | 367304..367984 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| RP72_RS01975 (RP72_01975) | yckB | 367994..368857 (-) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| RP72_RS23185 | - | 369019..369216 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| RP72_RS01985 (RP72_01985) | yckC | 369235..369690 (+) | 456 | WP_003246356.1 | RDD family protein | - |
| RP72_RS01990 (RP72_01990) | yckD | 369772..370104 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| RP72_RS01995 (RP72_01995) | bglC | 370258..371691 (+) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| RP72_RS02000 (RP72_02000) | nin/comJ | 371728..372126 (-) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| RP72_RS02005 (RP72_02005) | nucA/comI | 372153..372602 (-) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| RP72_RS02010 (RP72_02010) | tlpC | 372770..374491 (-) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| RP72_RS02015 (RP72_02015) | hxlB | 374602..375159 (-) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| RP72_RS02020 (RP72_02020) | hxlA | 375165..375797 (-) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| RP72_RS02025 (RP72_02025) | hxlR | 376030..376392 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14996.95 Da Isoelectric Point: 4.8991
>NTDB_id=136239 RP72_RS02000 WP_003246342.1 371728..372126(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
Nucleotide
Download Length: 399 bp
>NTDB_id=136239 RP72_RS02000 WP_003246342.1 371728..372126(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |