Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AN924_RS09630 Genome accession   NZ_CP012731
Coordinates   1918302..1918976 (-) Length   224 a.a.
NCBI ID   WP_237369268.1    Uniprot ID   -
Organism   Streptococcus suis strain 90-1330     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1913302..1923976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AN924_RS09610 (AN924_19960) - 1913952..1914473 (+) 522 WP_002935005.1 AAA family ATPase -
  AN924_RS09615 (AN924_19970) xerS 1914639..1915709 (+) 1071 WP_002935006.1 tyrosine recombinase XerS Machinery gene
  AN924_RS09620 (AN924_19980) - 1915779..1917287 (-) 1509 WP_062897121.1 phosphoglucomutase -
  AN924_RS09625 (AN924_19990) - 1917364..1918305 (-) 942 WP_053864590.1 sensor histidine kinase -
  AN924_RS09630 (AN924_20000) braR 1918302..1918976 (-) 675 WP_237369268.1 response regulator transcription factor Regulator
  AN924_RS09635 (AN924_20010) - 1919008..1919265 (-) 258 WP_062897123.1 type II toxin-antitoxin system RelE family toxin -
  AN924_RS09640 (AN924_20020) relB 1919255..1919494 (-) 240 WP_002935014.1 type II toxin-antitoxin system RelB family antitoxin -
  AN924_RS09645 (AN924_20030) - 1919586..1921556 (-) 1971 WP_013730363.1 FtsX-like permease family protein -
  AN924_RS09650 (AN924_20040) - 1921557..1922309 (-) 753 WP_002935019.1 ABC transporter ATP-binding protein -
  AN924_RS09655 (AN924_20050) - 1922326..1922709 (-) 384 WP_002935021.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  AN924_RS09660 (AN924_20060) - 1922722..1922862 (-) 141 WP_002935023.1 hypothetical protein -
  AN924_RS09665 (AN924_20070) - 1922961..1923695 (-) 735 WP_002935025.1 TraX family protein -
  AN924_RS11325 (AN924_20080) - 1923708..1923845 (-) 138 WP_002935027.1 hypothetical protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 25901.90 Da        Isoelectric Point: 5.8963

>NTDB_id=136206 AN924_RS09630 WP_237369268.1 1918302..1918976(-) (braR) [Streptococcus suis strain 90-1330]
MKKMKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPII
FISSSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSSELSIDQFQLSLDGRFTNKSEQVQLSPTETK
ILSALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVNELGFNRIHTVRGLGYVIR

Nucleotide


Download         Length: 675 bp        

>NTDB_id=136206 AN924_RS09630 WP_237369268.1 1918302..1918976(-) (braR) [Streptococcus suis strain 90-1330]
ATGAAGAAGATGAAAAAAGAGAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAACACCTTGG
CAAATCTTATCAGGTAGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTGGCGGAAATCAAACCAGACTTGGTGC
TGATGGACATTAGCCTGCCTTATTACAACGGTTTTTACTGGACGACTGAAATCCGTAAAACCATGACCATGCCGATTATC
TTTATCTCTTCTAGCGATGATGAGATGAATGCAGTTATGGCTATGAACATGGGTGGTGATGATTTTGTGTCAAAGCCTTT
TTCACTGGGAATTTTGGATGCCAAAATCGGAGCCTTCTTGCGTCGGGTTAATCAATTCAGCAAATCGAGCGAATTGTCTA
TCGACCAGTTCCAGCTTAGTTTAGACGGACGATTTACAAACAAATCGGAACAGGTTCAACTTTCACCTACGGAAACCAAG
ATTTTGTCCGCCTTGCTAGAAAGACAAGGGCAGATTGTCAGCAAGGAAGAACTCTTGGAAAAGCTCTGGGAAAATGAAGA
ATTTATCGACCAGAATACGCTCAATGTCAACATGACCCGTCTGCGTAAGAAAGTCAACGAACTGGGCTTTAACCGCATTC
ATACGGTGCGGGGGTTGGGGTACGTGATTCGATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(9-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

97.321

0.46

Multiple sequence alignment