Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PJ16_RS07500 Genome accession   NZ_CP010301
Coordinates   1391723..1392691 (+) Length   322 a.a.
NCBI ID   WP_043012924.1    Uniprot ID   A0A5T0F7R6
Organism   Campylobacter jejuni subsp. jejuni strain 00-0949     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1386723..1397691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJ16_RS07475 (PJ16_07475) cdsA 1387633..1388358 (-) 726 WP_002875974.1 phosphatidate cytidylyltransferase -
  PJ16_RS07480 (PJ16_07480) - 1388367..1388705 (-) 339 WP_002852397.1 hypothetical protein -
  PJ16_RS07485 (PJ16_07485) - 1388707..1390014 (-) 1308 WP_043012923.1 NFACT family protein -
  PJ16_RS07490 (PJ16_07490) mobA 1390076..1390651 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  PJ16_RS07495 (PJ16_07495) pldA 1390648..1391637 (+) 990 WP_002864239.1 phospholipase A -
  PJ16_RS07500 (PJ16_07500) ceuB 1391723..1392691 (+) 969 WP_043012924.1 ABC transporter permease Machinery gene
  PJ16_RS07505 (PJ16_07505) ceuC 1392684..1393622 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  PJ16_RS07510 (PJ16_07510) ceuD 1393619..1394374 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  PJ16_RS07515 (PJ16_07515) ceuB 1394387..1395379 (+) 993 WP_002898681.1 enterochelin ABC transporter substrate-binding protein CeuB -
  PJ16_RS07525 (PJ16_07525) - 1395605..1396159 (-) 555 WP_043012925.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35439.37 Da        Isoelectric Point: 9.6678

>NTDB_id=136106 PJ16_RS07500 WP_043012924.1 1391723..1392691(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain 00-0949]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITGLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=136106 PJ16_RS07500 WP_043012924.1 1391723..1392691(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain 00-0949]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTGGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0F7R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.758

100

0.988

Multiple sequence alignment