Detailed information NTG0136101

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: PJ16_RS05975
• Genome accession: NZ_CP010301
• Coordinates: 1122278..1123237 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain 00-0949
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1117278..1128237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PJ16_RS05950 (PJ16_05950)	neuC	1117843..1118958 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
PJ16_RS10505 (PJ16_05955)	-	1118955..1119869 (+)	915	Protein_1148	beta-1,4-N-acetylgalactosaminyltransferase	-
PJ16_RS10510 (PJ16_05960)	-	1119903..1120565 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
PJ16_RS05965 (PJ16_05965)	-	1120560..1121411 (-)	852	WP_043020460.1	glycosyltransferase	-
PJ16_RS05970 (PJ16_05970)	waaV	1121395..1122219 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
PJ16_RS05975 (PJ16_05975)	waaF	1122278..1123237 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
PJ16_RS05980 (PJ16_05980)	gmhA	1123218..1123778 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
PJ16_RS05985 (PJ16_05985)	rfaE1	1123775..1125160 (-)	1386	WP_014516805.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
PJ16_RS05990 (PJ16_05990)	rfaD	1125153..1126106 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
PJ16_RS05995 (PJ16_05995)	gmhB	1126107..1126668 (-)	562	Protein_1156	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
PJ16_RS06000 (PJ16_06000)	-	1126749..1127051 (+)	303	WP_002852762.1	cytochrome c	-
PJ16_RS06005 (PJ16_06005)	ccoS	1127074..1127280 (-)	207	WP_002875422.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=136101 PJ16_RS05975 WP_002875425.1 1122278..1123237(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 00-0949]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=136101 PJ16_RS05975 WP_002875425.1 1122278..1123237(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 00-0949]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1