Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   SanJ4206_RS07645 Genome accession   NZ_CP012719
Coordinates   1571368..1571826 (-) Length   152 a.a.
NCBI ID   WP_004224071.1    Uniprot ID   A0ABD7NGI2
Organism   Streptococcus anginosus strain J4206     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1566368..1576826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS07625 (SanJ4206_1477c) - 1567004..1567324 (-) 321 WP_003027417.1 PTS cellobiose transporter subunit IIA -
  SanJ4206_RS07630 (SanJ4206_1478c) - 1567335..1567649 (-) 315 WP_022525145.1 PTS cellobiose transporter subunit IIB -
  SanJ4206_RS07635 (SanJ4206_1479c) rcrQ 1567859..1569619 (-) 1761 WP_003027423.1 ABC transporter ATP-binding protein Regulator
  SanJ4206_RS07640 (SanJ4206_1480c) rcrP 1569609..1571375 (-) 1767 WP_003027425.1 ABC transporter ATP-binding protein Regulator
  SanJ4206_RS07645 (SanJ4206_1481c) rcrR 1571368..1571826 (-) 459 WP_004224071.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SanJ4206_RS07650 (SanJ4206_1482c) - 1571983..1572393 (-) 411 WP_022525146.1 peptide deformylase -
  SanJ4206_RS07655 (SanJ4206_1483c) scrK 1572458..1573357 (-) 900 WP_037582535.1 fructokinase ScrK -
  SanJ4206_RS07660 (SanJ4206_1484c) - 1573632..1575530 (-) 1899 WP_022525147.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17849.82 Da        Isoelectric Point: 6.7239

>NTDB_id=136091 SanJ4206_RS07645 WP_004224071.1 1571368..1571826(-) (rcrR) [Streptococcus anginosus strain J4206]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCDKMTFIKDIEQELGITKSVASNLMKRMVKNGL
IYLEVSETDKRAKIIRLTPESKERMDKIRDFFDEMDRCLLAGVSEEDLVIFFQVMGKFYQNIEKLEEGETNV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=136091 SanJ4206_RS07645 WP_004224071.1 1571368..1571826(-) (rcrR) [Streptococcus anginosus strain J4206]
ATGGAAAAACCATTATTGGAATTCAAGCGATTTGGGCGAAAAACGCATCTTATGATTCAAAAGATTGCCAAAGAGCGAGG
AATTGAATTTATGGCGGGTCCACAGGGGCAGGTATTGCATTTTGTGAACCACCGCGAAGATTGTGACAAGATGACCTTTA
TTAAAGATATTGAGCAGGAGTTGGGCATTACTAAGTCCGTTGCCAGTAATTTAATGAAGCGGATGGTGAAAAATGGCTTG
ATTTATCTGGAAGTGAGTGAGACCGATAAACGCGCTAAGATTATTCGTTTGACGCCGGAATCAAAAGAACGCATGGATAA
AATTCGTGATTTCTTTGATGAAATGGATCGTTGTCTGTTAGCTGGCGTTTCAGAAGAGGATCTGGTCATTTTTTTTCAGG
TAATGGGAAAATTTTACCAGAATATTGAAAAATTAGAAGAAGGAGAAACGAATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0ABD7NGI2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.466

96.053

0.408