Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   SanJ4206_RS06850 Genome accession   NZ_CP012719
Coordinates   1422689..1423642 (+) Length   317 a.a.
NCBI ID   WP_003030155.1    Uniprot ID   A0ABD7NGE1
Organism   Streptococcus anginosus strain J4206     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1417689..1428642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS06830 (SanJ4206_1322c) - 1419749..1420441 (-) 693 WP_022525049.1 phosphoglycerate mutase -
  SanJ4206_RS06835 (SanJ4206_1323c) perR 1420582..1421043 (-) 462 WP_003030152.1 peroxide-responsive transcriptional repressor PerR -
  SanJ4206_RS06840 (SanJ4206_1324c) - 1421221..1421496 (-) 276 WP_003023726.1 HU family DNA-binding protein -
  SanJ4206_RS06845 (SanJ4206_1325c) - 1421625..1422458 (-) 834 WP_003030154.1 DegV family protein -
  SanJ4206_RS06850 (SanJ4206_1326) ceuB 1422689..1423642 (+) 954 WP_003030155.1 ABC transporter permease Machinery gene
  SanJ4206_RS06855 (SanJ4206_1327) - 1423635..1424051 (+) 417 Protein_1315 iron chelate uptake ABC transporter family permease subunit -
  SanJ4206_RS06860 (SanJ4206_1328c) - 1424070..1425005 (-) 936 Protein_1316 IS30 family transposase -
  SanJ4206_RS06865 (SanJ4206_1329) - 1425101..1425658 (+) 558 Protein_1317 iron chelate uptake ABC transporter family permease subunit -
  SanJ4206_RS06870 (SanJ4206_1330) - 1425660..1426412 (+) 753 WP_003030160.1 ABC transporter ATP-binding protein -
  SanJ4206_RS06875 (SanJ4206_1331) - 1426436..1427410 (+) 975 WP_022525051.1 siderophore ABC transporter substrate-binding protein -
  SanJ4206_RS06880 (SanJ4206_1332c) - 1427473..1428203 (-) 731 Protein_1320 metallophosphoesterase -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35244.09 Da        Isoelectric Point: 9.8532

>NTDB_id=136083 SanJ4206_RS06850 WP_003030155.1 1422689..1423642(+) (ceuB) [Streptococcus anginosus strain J4206]
MKQTKFLGILCLALVMISITVGSSHFSWWQLLYGDKQTGLLFWESRLPRTISILLAGSSMSIAGLLMQTVTQNHFAAPST
VGTVEAAKFGMLLSLFFFPSATLAQKMLFAFVSAIFFTIIFIRFIRKFSFKEKWLLPLVGIIYSGVISAAGEIIAYRFDL
VQSMTSWTQGSFSMIQKHQYEWLFLSLIILIAVWKLSATFTIMNLGEDASHNLGISFYQMEGMTLFLIALTTSVTMITVG
SLPFIGVIVPNIIRKFYGDHITRIKGLTALTGACLILACDIVARLVIRPYEVSVSLILGILGSLAFVYLLWRGAAHE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=136083 SanJ4206_RS06850 WP_003030155.1 1422689..1423642(+) (ceuB) [Streptococcus anginosus strain J4206]
ATGAAACAGACAAAATTTTTAGGAATTCTTTGTCTTGCTCTGGTTATGATTTCAATTACAGTTGGTTCTAGCCACTTTTC
GTGGTGGCAACTGCTATATGGAGATAAGCAGACCGGTCTGCTATTTTGGGAGTCACGCTTGCCAAGGACAATTAGTATTC
TCCTAGCAGGCTCTAGTATGAGCATTGCCGGGCTTCTTATGCAGACTGTTACACAAAATCATTTTGCTGCTCCTAGTACA
GTTGGAACGGTCGAGGCTGCGAAATTTGGTATGTTGCTCAGTTTATTTTTCTTTCCGTCAGCCACATTAGCGCAAAAAAT
GCTATTTGCTTTTGTATCTGCTATTTTTTTTACAATTATTTTTATTAGATTTATCAGAAAATTCTCATTTAAAGAAAAAT
GGTTGTTACCGCTTGTCGGAATTATTTATAGTGGGGTGATTAGCGCAGCTGGAGAAATCATTGCTTATCGTTTTGATCTT
GTCCAAAGCATGACTTCATGGACACAAGGCTCTTTTTCCATGATTCAGAAACATCAATATGAATGGTTGTTTTTAAGTTT
AATCATCTTGATTGCGGTATGGAAACTATCAGCCACGTTTACCATTATGAATCTAGGGGAAGACGCCAGTCATAATCTAG
GCATTTCCTTTTACCAAATGGAGGGAATGACGTTGTTTCTCATTGCATTGACAACAAGTGTGACGATGATTACAGTCGGC
TCTCTTCCATTTATCGGAGTCATTGTTCCAAACATCATTCGGAAATTTTATGGTGACCATATCACGCGCATTAAGGGACT
GACCGCATTAACTGGTGCCTGTCTCATCTTAGCCTGTGATATTGTAGCGCGTCTAGTCATTCGTCCTTACGAAGTCTCCG
TCAGCTTGATTTTAGGAATTTTGGGTAGTTTGGCGTTCGTGTATCTTTTGTGGCGAGGTGCTGCTCATGAATAA

Domains


Predicted by InterProScan.

(10-312)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0ABD7NGE1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

38.206

94.953

0.363


Multiple sequence alignment