Detailed information
Bioinformatically predicted
Overview
| Name | rpoS | Type | Regulator |
| Locus tag | SanJ4206_RS04530 | Genome accession | NZ_CP012719 |
| Coordinates | 929051..930163 (+) | Length | 370 a.a. |
| NCBI ID | WP_003024631.1 | Uniprot ID | A0A0P0N8U3 |
| Organism | Streptococcus anginosus strain J4206 | ||
| Function | regulation of chitinases (predicted from homology) Competence regulation |
||
Genomic Context
Location: 924051..935163
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SanJ4206_RS04510 (SanJ4206_0856) | - | 925790..926128 (+) | 339 | WP_003024641.1 | ATP cone domain-containing protein | - |
| SanJ4206_RS04515 (SanJ4206_0857) | rpsU | 926323..926499 (+) | 177 | WP_000048054.1 | 30S ribosomal protein S21 | - |
| SanJ4206_RS04520 (SanJ4206_0858c) | mscL | 926741..927118 (-) | 378 | WP_003029780.1 | large conductance mechanosensitive channel protein MscL | - |
| SanJ4206_RS04525 (SanJ4206_0859) | dnaG | 927273..929048 (+) | 1776 | WP_022525117.1 | DNA primase | - |
| SanJ4206_RS04530 (SanJ4206_0860) | rpoS | 929051..930163 (+) | 1113 | WP_003024631.1 | RNA polymerase sigma factor RpoD | Regulator |
| SanJ4206_RS04535 (SanJ4206_0861) | - | 930182..930511 (+) | 330 | WP_003029776.1 | metal-sulfur cluster assembly factor | - |
| SanJ4206_RS04540 (SanJ4206_0862) | brnQ | 930666..931994 (+) | 1329 | WP_003029774.1 | branched-chain amino acid transport system II carrier protein | - |
| SanJ4206_RS04545 (SanJ4206_0863) | ccdA2 | 932132..932842 (+) | 711 | WP_003029773.1 | thiol-disulfide oxidoreductase-associated membrane protein CcdA2 | - |
| SanJ4206_RS04550 (SanJ4206_0864) | - | 932856..933419 (+) | 564 | WP_022525118.1 | redoxin domain-containing protein | - |
| SanJ4206_RS04555 (SanJ4206_0865) | msrB | 933432..934550 (+) | 1119 | WP_037582730.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
Sequence
Protein
Download Length: 370 a.a. Molecular weight: 42439.09 Da Isoelectric Point: 4.4643
>NTDB_id=136069 SanJ4206_RS04530 WP_003024631.1 929051..930163(+) (rpoS) [Streptococcus anginosus strain J4206]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED
Nucleotide
Download Length: 1113 bp
>NTDB_id=136069 SanJ4206_RS04530 WP_003024631.1 929051..930163(+) (rpoS) [Streptococcus anginosus strain J4206]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAGGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCTAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCCACTTGGTGGATTCGTCAAGCAATTACTCGTGCGATTGCTGACCAAGCTCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAACAACGAAATCTTTTGCAAGAATTGGGGCAAGATCCAACGCCAGAGCAAATT
GCGGAGCGCATGGATATGACACCAGACAAAGTTCGTGAAATTTTGAAGATTGCTCAAGAGCCGGTCTCTCTTGAAACACC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTATACAACAC
GTATCGTTCTGCGTGAGCAATTAGACGAGGTTCTTGACACATTAACAGACCGTGAAGAAAATGTACTACGTCTGCGTTTC
GGTCTAGATGATGGGAAAATGCGTACGCTGGAAGATGTTGGAAAAGTCTTTAACGTAACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAGTCGTAGCAAGCCACTTCGTGACTTTATTGAGGATTAG
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAGGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCTAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCCACTTGGTGGATTCGTCAAGCAATTACTCGTGCGATTGCTGACCAAGCTCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAACAACGAAATCTTTTGCAAGAATTGGGGCAAGATCCAACGCCAGAGCAAATT
GCGGAGCGCATGGATATGACACCAGACAAAGTTCGTGAAATTTTGAAGATTGCTCAAGAGCCGGTCTCTCTTGAAACACC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTATACAACAC
GTATCGTTCTGCGTGAGCAATTAGACGAGGTTCTTGACACATTAACAGACCGTGAAGAAAATGTACTACGTCTGCGTTTC
GGTCTAGATGATGGGAAAATGCGTACGCTGGAAGATGTTGGAAAAGTCTTTAACGTAACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAGTCGTAGCAAGCCACTTCGTGACTTTATTGAGGATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rpoS | Vibrio cholerae O1 biovar El Tor strain E7946 |
46.918 |
78.919 |
0.37 |