Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   FORC10_RS26135 Genome accession   NZ_CP010272
Coordinates   5134055..5134489 (+) Length   144 a.a.
NCBI ID   WP_000811494.1    Uniprot ID   A0A9Q6M5X1
Organism   Bacillus cereus strain FORC_010     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 5129055..5139489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC10_RS26115 (FORC10_4954) - 5129969..5131132 (-) 1164 WP_000434577.1 aminotransferase A -
  FORC10_RS26120 (FORC10_4955) - 5131255..5131455 (-) 201 WP_000929280.1 hypothetical protein -
  FORC10_RS26125 (FORC10_4956) kinB 5131766..5133040 (+) 1275 WP_025709085.1 sporulation sensor histidine kinase KinB -
  FORC10_RS26130 (FORC10_4957) - 5133079..5133828 (-) 750 WP_000388471.1 DUF3967 domain-containing protein -
  FORC10_RS26135 (FORC10_4958) nucA/comI 5134055..5134489 (+) 435 WP_000811494.1 DNA-entry nuclease Machinery gene
  FORC10_RS26140 (FORC10_4959) comJ 5134526..5134915 (+) 390 WP_000424030.1 competence protein ComJ -
  FORC10_RS26145 (FORC10_4960) metE 5134954..5137242 (-) 2289 WP_001007610.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  FORC10_RS26150 (FORC10_4961) - 5137756..5138313 (-) 558 WP_000062062.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16054.43 Da        Isoelectric Point: 8.4331

>NTDB_id=135675 FORC10_RS26135 WP_000811494.1 5134055..5134489(+) (nucA/comI) [Bacillus cereus strain FORC_010]
MKQLKGIIISIIAILSILVAVYEVLVPEETSVKKTNTYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFEVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=135675 FORC10_RS26135 WP_000811494.1 5134055..5134489(+) (nucA/comI) [Bacillus cereus strain FORC_010]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATCGCAATTCTGTCTATTTTAGTAGCAGTTTATGAAGTACTTGTGCC
AGAGGAAACAAGTGTAAAGAAAACGAATACGTATGATCAAGTGTTAGAATTTCCGAAAGAACGTTATCCAGAGACAGGAA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTTTGTACAATCGATCGTGGTGGTGCTGCAGATAGAAGGAAA
TTGTCGTTAGCACCATATCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGCAAGGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCGGCGGATAACCGTGGAGCAGGCTCTTGGGTAGGGAATAAGTTAGATAAATACC
CAGATGGTACGCGAGTAAAATTTGAAGTGAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

69.912

78.472

0.549

Multiple sequence alignment