Detailed information NTG0135655

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FORC10_RS18830
• Genome accession: NZ_CP010272
• Coordinates: 3748067..3749194 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470745.1
• Uniprot ID: A0A9W5QA17
• Organism: Bacillus cereus strain FORC_010
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3743067..3754194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC10_RS18820 (FORC10_3559)	gyrA	3743546..3746017 (-)	2472	WP_025710392.1	DNA gyrase subunit A	-
FORC10_RS18825 (FORC10_3560)	gyrB	3746106..3748028 (-)	1923	WP_000435982.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FORC10_RS18830 (FORC10_3561)	recF	3748067..3749194 (-)	1128	WP_000470745.1	DNA replication/repair protein RecF	Machinery gene
FORC10_RS18835 (FORC10_3562)	yaaA	3749207..3749419 (-)	213	WP_000821364.1	S4 domain-containing protein YaaA	-
FORC10_RS18840 (FORC10_3563)	dnaN	3749547..3750692 (-)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
FORC10_RS18845 (FORC10_3564)	dnaA	3750871..3752211 (-)	1341	WP_000428017.1	chromosomal replication initiator protein DnaA	-
FORC10_RS18850 (FORC10_041)	rpmH	3752776..3752910 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
FORC10_RS18855 (FORC10_3565)	rnpA	3752987..3753334 (+)	348	WP_025710391.1	ribonuclease P protein component	-
FORC10_RS18860 (FORC10_3566)	spoIIIJ	3753387..3754163 (+)	777	WP_025710390.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.67 Da
• Isoelectric Point: 6.6001

>NTDB_id=135655 FORC10_RS18830 WP_000470745.1 3748067..3749194(-) (recF) [Bacillus cereus strain FORC_010]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRE

Nucleotide

• Length: 1128 bp

>NTDB_id=135655 FORC10_RS18830 WP_000470745.1 3748067..3749194(-) (recF) [Bacillus cereus strain FORC_010]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCGCAAGGGAAAACAAATTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGATTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTGTATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGAGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTGATTGGTCCTCATCG
TGACGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTGATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGTTGGATGATGTTTTATCA
GAATTAGATGATTATCGTCAATCACATCTTTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACTGTAGATTGTGAAATAGATA
GGGAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.576	98.133	0.653