Detailed information NTG0135643

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: FORC10_RS12920
• Genome accession: NZ_CP010272
• Coordinates: 2587153..2589753 (-)
• Length: 866 a.a.
• NCBI ID: WP_016122101.1
• Uniprot ID: -
• Organism: Bacillus cereus strain FORC_010
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2582153..2594753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC10_RS12890 (FORC10_2524)	fabF	2582298..2583536 (-)	1239	WP_000412656.1	beta-ketoacyl-ACP synthase II	-
FORC10_RS12895 (FORC10_2525)	fabH	2583568..2584500 (-)	933	WP_001100545.1	beta-ketoacyl-ACP synthase III	-
FORC10_RS12900 (FORC10_2526)	comZ	2584908..2585084 (-)	177	WP_001986215.1	ComZ family protein	Regulator
FORC10_RS12905 (FORC10_2527)	-	2585139..2586011 (-)	873	WP_006921015.1	NAD(P)-dependent oxidoreductase	-
FORC10_RS12910 (FORC10_2528)	-	2586041..2586775 (-)	735	WP_000028691.1	hydrolase	-
FORC10_RS12915 (FORC10_2529)	-	2586932..2587114 (+)	183	WP_001211116.1	YjzD family protein	-
FORC10_RS12920 (FORC10_2530)	clpC	2587153..2589753 (-)	2601	WP_016122101.1	ATP-dependent chaperone ClpB	Regulator
FORC10_RS12925 (FORC10_2531)	-	2589963..2590142 (-)	180	WP_000531421.1	YjzC family protein	-
FORC10_RS12930 (FORC10_2532)	-	2590633..2591442 (+)	810	WP_001041232.1	Cof-type HAD-IIB family hydrolase	-
FORC10_RS12935	-	2591548..2591688 (+)	141	WP_000516816.1	hypothetical protein	-
FORC10_RS12940 (FORC10_2533)	-	2591689..2591886 (+)	198	WP_000527407.1	DUF3813 domain-containing protein	-
FORC10_RS12945 (FORC10_2534)	-	2591912..2592769 (-)	858	WP_000364431.1	YitT family protein	-
FORC10_RS12950	-	2592870..2593001 (+)	132	WP_001120851.1	DUF3941 domain-containing protein	-
FORC10_RS12955 (FORC10_2535)	prsA	2593131..2593988 (+)	858	WP_001214202.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97430.39 Da
• Isoelectric Point: 5.1561

>NTDB_id=135643 FORC10_RS12920 WP_016122101.1 2587153..2589753(-) (clpC) [Bacillus cereus strain FORC_010]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTIHLLFALLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
VGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=135643 FORC10_RS12920 WP_016122101.1 2587153..2589753(-) (clpC) [Bacillus cereus strain FORC_010]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAGGTGGATACTATTCATCTATTATTTGCATTATTAGAAGAGCAAGATGGGTTAGCGGTACGTATATTTCAAAAAATGA
ATGTTGATATAGAAGCATTAAAGCAAGGTGCTGAAAGTTTAATTAAAAAGAAACCTTCTGTAACGGGGAGCGGTGCAGAA
GTTGGAAAATTGTATGTAACGAGCGCTCTGCAACAACTGCTTGTAAGAGCAGGGAAAGAAGCAGAAAAACTGCAGGATGA
TTACATTTCAGTAGAACATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATAAATCAATTATTTACAAGATTGCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACGAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTGGCGGAAGTGAGAGCAGGGAAAATTGATCCTGTAATCGGCCGTGA
TAGTGAAATACGACGTGTAATCCGTATTCTTTCACGTAAAACGAAAAACAATCCGGTTTTAATTGGGGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGGCTAGCCCAGCGTATTGTGAAAAAGGATGTACCTGAAGGATTGAAAGATAGAACGATT
TTTGCGTTAGATATGAGTGCACTCGTAGCTGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGCATTTTATTATTCATTGATGAACTTCATACAATAGTTGGAGCTGGTAAAACAGAAG
GAGCCATGGATGCAGGAAATATGTTAAAACCGATGCTTGCACGTGGTGAACTGCATTGTATTGGAGCCACAACACTAGAT
GAATATCGCAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAGCCAACTGTTGA
AGATACGATTTCCATTTTACGTGGATTAAAAGAACGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGTGCGATTG
TAGCAGCATCTGTTTTATCAGATCGATATATTTCAGATCGCTTCTTACCAGATAAAGCAATTGATCTTGTTGACGAAGCG
TGTGCAACAATTCGTACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT
TGAAGAAGCGGCTCTTGGGAAAGAAACGGATCGTGGTAGCCAAGAGCGTCTAAAAACATTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCCAGTGGCATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCACAAAGTTCGTGACTTACGTGAG
CATTTAGAACGTTTGCGTCGTGAATTAGAAGAAGCAGAAGGCAATTACGATTTAAATAAAGCAGCCGAACTTCGTCACGG
GAAAATTCCCGCAATTGAAAAAGAGTTAAAAGAAGCGGAAGAAATGGGCGCGCATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCAGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCGAAACTCGTGGAAGGT
GAACGCGAGAAATTATTACGCTTAGAGCAAATCTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCTTAGTGTC
AGACGCGGTTCTTCGTGCTCGGGCTGGTATTAAAGATCCGAACCGCCCGATTGGTTCTTTCATCTTCTTAGGGCCAACAG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCCCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGCATTGACATG
TCTGAGTATATGGAAAAACACGCCGTGTCTCGCTTAATTGGTGCACCTCCTGGATATGTAGGATATGAAGAAGGCGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCATATTCCGTTGTTTTATTAGATGAAATTGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGACGCATTACAGATTCGCAAGGTCGTACAGTGGACTTTAAAAATACAGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTACTAGATGGATTAGAAGAAGATGGTTCGATTAAAGAGGAATCAAGAGA
CCTTGTAATGGGGCAATTAAGAGGACATTTCCGCCCTGAATTTTTAAACCGTGTGGATGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGCATTGTTGATAAAATTGTAAAAGAACTACAAGGTCGTCTAGCTGACCGTCACATTACA
GTAGAATTAACAGATGCAGCAAAAGAATTTGTTGTGGAAGCCGGTTTCGACCCAATGTACGGAGCTCGTCCATTAAAACG
ATACGTACAGCGTCAAGTGGAAACGAAATTAGCACGAGAATTAATTGCAGGAACAATTACTGATAATAGTCACGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• AAA lid domain (AAA_lid_9) (345-447)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.886	100	0.484
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.153	100	0.425
clpC	Lactococcus lactis subsp. cremoris KW2	47.059	82.448	0.388