Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   RN86_RS11075 Genome accession   NZ_CP012648
Coordinates   2275534..2276310 (+) Length   258 a.a.
NCBI ID   WP_053794876.1    Uniprot ID   -
Organism   Streptococcus gordonii strain KCOM 1506 (= ChDC B679)     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2270534..2281310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RN86_RS11055 (RN86_11060) glpO 2270543..2272369 (+) 1827 WP_053794872.1 type 1 glycerol-3-phosphate oxidase -
  RN86_RS11060 (RN86_11065) - 2272437..2273141 (+) 705 WP_053794873.1 MIP/aquaporin family protein -
  RN86_RS11065 (RN86_11070) rlmD 2273284..2274675 (-) 1392 WP_053794874.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  RN86_RS11070 (RN86_11075) - 2274731..2275507 (+) 777 WP_053794875.1 aminoglycoside 3'-phosphotransferase -
  RN86_RS11075 (RN86_11080) recX 2275534..2276310 (+) 777 WP_053794876.1 recombination regulator RecX Regulator
  RN86_RS11080 (RN86_11085) - 2276400..2276933 (+) 534 WP_012000105.1 DUF402 domain-containing protein -
  RN86_RS11085 (RN86_11090) - 2277049..2277366 (+) 318 WP_046165933.1 DUF960 domain-containing protein -

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 30484.85 Da        Isoelectric Point: 9.3577

>NTDB_id=135529 RN86_RS11075 WP_053794876.1 2275534..2276310(+) (recX) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
MKITKIEKKKRLYLLELDDSEKLYITEDTIVRFMLSKGMEITEQELSEIQHYAQFSYGKNLALYHLSFKQRTAKEVKDYL
TQHDIQPEIISQVLDNLKKDNWINDRKYAHSFIQSNLLTGDKGAFVLKQKLTQKGISSTIIEEELSQFDFTELTDKVAEK
LLKKYQGKLPSKALQEKILQSLINKGFSYSQAKKAYQYLDIEEDQKNQEELLYKELDKQYRKYSKKYNGYDLKQRLTQAL
ARKGYDFSDIASALRDYF

Nucleotide


Download         Length: 777 bp        

>NTDB_id=135529 RN86_RS11075 WP_053794876.1 2275534..2276310(+) (recX) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
ATGAAAATCACAAAAATCGAAAAGAAAAAAAGACTCTACCTCTTGGAGTTGGACGACAGTGAAAAGCTCTATATTACAGA
AGACACCATCGTTCGCTTCATGCTGTCCAAAGGAATGGAAATCACAGAGCAGGAGCTATCAGAAATTCAGCACTATGCCC
AATTTTCCTACGGAAAAAATCTAGCCCTCTATCATCTCTCCTTCAAGCAAAGAACCGCCAAGGAAGTTAAAGACTACTTA
ACGCAGCACGACATCCAACCAGAAATCATCAGTCAGGTCTTGGACAATCTAAAAAAGGATAATTGGATTAATGATAGAAA
ATATGCTCATTCTTTTATCCAATCCAACCTTCTCACTGGTGACAAAGGCGCTTTTGTTCTCAAGCAAAAGCTCACGCAAA
AAGGAATTTCTAGCACTATCATTGAAGAAGAATTGAGCCAGTTTGATTTCACTGAATTAACAGACAAGGTTGCCGAAAAG
CTTCTCAAAAAATACCAGGGAAAACTGCCCAGCAAGGCCCTACAAGAAAAAATTCTTCAATCCTTGATAAACAAAGGTTT
TTCATATAGCCAAGCAAAAAAAGCCTATCAGTATTTGGACATCGAAGAAGACCAAAAGAACCAAGAAGAGCTACTCTATA
AAGAGTTAGACAAGCAATACCGCAAGTACTCAAAAAAGTACAACGGCTATGACTTAAAACAGCGTCTGACCCAAGCTCTA
GCTCGCAAAGGCTATGATTTCTCTGATATCGCTAGCGCTCTGAGAGATTATTTCTAA

Domains


Predicted by InterProScan.

(80-197)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.581

100

0.368


Multiple sequence alignment