Detailed information NTG0135196

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AN204_RS22915
• Genome accession: NZ_CP012633
• Coordinates: 4655578..4656603 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain SF-166
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4650578..4661603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AN204_RS22895 (AN204_22890)	metJ	4651763..4652080 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AN204_RS22900 (AN204_22895)	yiiX	4652140..4652748 (+)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
AN204_RS22905 (AN204_22900)	rpmE	4652809..4653021 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AN204_RS22910 (AN204_22905)	priA	4653224..4655422 (+)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
AN204_RS22915 (AN204_22910)	cytR	4655578..4656603 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AN204_RS22920 (AN204_22915)	ftsN	4656695..4657654 (+)	960	WP_000068834.1	cell division protein FtsN	-
AN204_RS22925 (AN204_22920)	hslV	4657747..4658277 (+)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
AN204_RS22930 (AN204_22925)	hslU	4658287..4659618 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AN204_RS22935 (AN204_22930)	menA	4659685..4660611 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AN204_RS22940 (AN204_22935)	rraA	4660704..4661189 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AN204_RS22945 (AN204_22940)	zapB	4661274..4661519 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=135196 AN204_RS22915 WP_000644904.1 4655578..4656603(+) (cytR) [Escherichia coli strain SF-166]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=135196 AN204_RS22915 WP_000644904.1 4655578..4656603(+) (cytR) [Escherichia coli strain SF-166]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628