Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AN158_RS03445 Genome accession   NZ_CP012587
Coordinates   745112..746053 (-) Length   313 a.a.
NCBI ID   WP_001159458.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain CA-17     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 740112..751053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AN158_RS03430 (AN158_03425) bauB 742423..743391 (-) 969 WP_069370354.1 siderophore-binding periplasmic lipoprotein BauB -
  AN158_RS03435 (AN158_03430) bauE 743398..744168 (-) 771 WP_069370355.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  AN158_RS03440 (AN158_03435) bauC 744165..745112 (-) 948 WP_069370356.1 ferric acinetobactin ABC transporter permease subunit BauC -
  AN158_RS03445 (AN158_03440) ceuB 745112..746053 (-) 942 WP_001159458.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  AN158_RS17905 - 746053..746184 (-) 132 WP_001218004.1 hypothetical protein -
  AN158_RS03450 (AN158_03445) basB 746685..748715 (+) 2031 WP_119813350.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  AN158_RS03455 (AN158_03450) basA 748786..750633 (-) 1848 WP_069370358.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33965.00 Da        Isoelectric Point: 8.4665

>NTDB_id=134689 AN158_RS03445 WP_001159458.1 745112..746053(-) (ceuB) [Acinetobacter baumannii strain CA-17]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=134689 AN158_RS03445 WP_001159458.1 745112..746053(-) (ceuB) [Acinetobacter baumannii strain CA-17]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGTCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCAGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGC
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGTAAAATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATCCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTAATTGGTTTGATGTACGGCAGTGTACTGAGCGCTTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCCTAGGACTTA
GTTATGCAGCTATAGCCGCTATTGGTTTAATACTGGTTGCTATTACAGTGTCAACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTGCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTAGTTTGCGACATTCTTGGTCGCTCGATTATTTATCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422