Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BG06_RS19655 Genome accession   NZ_CP010088
Coordinates   3673718..3674512 (+) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus thuringiensis strain 97-27     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3668718..3679512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG06_RS19640 (BG06_3797) argR 3669557..3670006 (+) 450 WP_001032581.1 arginine repressor ArgR -
  BG06_RS19645 (BG06_3798) recN 3670274..3672013 (+) 1740 WP_000947750.1 DNA repair protein RecN Machinery gene
  BG06_RS19650 (BG06_3799) spoIVB 3672132..3673430 (+) 1299 WP_002054681.1 SpoIVB peptidase -
  BG06_RS19655 (BG06_3800) spo0A 3673718..3674512 (+) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  BG06_RS19660 (BG06_3801) - 3674798..3676324 (+) 1527 WP_000143146.1 glycosyltransferase family 39 protein -
  BG06_RS19665 (BG06_3802) - 3676493..3676636 (-) 144 WP_001247675.1 YycC family protein -
  BG06_RS19670 (BG06_3803) - 3676687..3677415 (+) 729 WP_000172591.1 glycerophosphodiester phosphodiesterase -
  BG06_RS19675 (BG06_3804) - 3677465..3677698 (-) 234 WP_001190187.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=134134 BG06_RS19655 WP_003161566.1 3673718..3674512(+) (spo0A) [Bacillus thuringiensis strain 97-27]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=134134 BG06_RS19655 WP_003161566.1 3673718..3674512(+) (spo0A) [Bacillus thuringiensis strain 97-27]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGACATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCCGAGTTTATTGCAATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P52928

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment