Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BG06_RS19290 | Genome accession | NZ_CP010088 |
| Coordinates | 3619702..3620745 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013193.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain 97-27 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3614702..3625745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG06_RS19255 (BG06_3721) | - | 3614956..3615330 (+) | 375 | WP_001012359.1 | nucleoside 2-deoxyribosyltransferase | - |
| BG06_RS19260 (BG06_3722) | - | 3615410..3615898 (+) | 489 | WP_000764247.1 | hypothetical protein | - |
| BG06_RS19265 (BG06_3723) | - | 3615935..3616246 (-) | 312 | WP_001093243.1 | hypothetical protein | - |
| BG06_RS19270 (BG06_3724) | - | 3616499..3616714 (+) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| BG06_RS19275 (BG06_3725) | - | 3616931..3618325 (-) | 1395 | WP_001094341.1 | L-cystine transporter | - |
| BG06_RS19280 (BG06_3726) | - | 3618433..3618675 (-) | 243 | WP_000440720.1 | DUF2626 domain-containing protein | - |
| BG06_RS19285 (BG06_3727) | - | 3618801..3619496 (-) | 696 | WP_000434132.1 | helix-turn-helix transcriptional regulator | - |
| BG06_RS19290 (BG06_3728) | comGA | 3619702..3620745 (+) | 1044 | WP_001013193.1 | competence protein ComGA | Machinery gene |
| BG06_RS19295 (BG06_3729) | comGB | 3620738..3621769 (+) | 1032 | WP_000472051.1 | comG operon protein ComGB | - |
| BG06_RS19300 (BG06_3730) | comGC | 3621781..3622080 (+) | 300 | WP_001178696.1 | comG operon protein ComGC | - |
| BG06_RS19305 (BG06_3731) | comGD | 3622077..3622532 (+) | 456 | WP_000810393.1 | comG operon protein ComGD | - |
| BG06_RS19310 (BG06_3732) | comGE | 3622525..3622827 (+) | 303 | WP_000829460.1 | competence type IV pilus minor pilin ComGE | - |
| BG06_RS19315 (BG06_3733) | comGF | 3622797..3623267 (+) | 471 | WP_000923094.1 | competence type IV pilus minor pilin ComGF | - |
| BG06_RS19320 (BG06_3734) | comGG | 3623264..3623635 (+) | 372 | WP_001231191.1 | competence type IV pilus minor pilin ComGG | - |
| BG06_RS19325 (BG06_3735) | - | 3623811..3624461 (+) | 651 | WP_000183880.1 | 2OG-Fe(II) oxygenase | - |
| BG06_RS19330 (BG06_3736) | aroK | 3624582..3625079 (+) | 498 | WP_000836631.1 | shikimate kinase AroK | - |
| BG06_RS19335 (BG06_3737) | - | 3625118..3625318 (+) | 201 | WP_000106081.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39377.92 Da Isoelectric Point: 9.2320
>NTDB_id=134132 BG06_RS19290 WP_001013193.1 3619702..3620745(+) (comGA) [Bacillus thuringiensis strain 97-27]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=134132 BG06_RS19290 WP_001013193.1 3619702..3620745(+) (comGA) [Bacillus thuringiensis strain 97-27]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAACAATGCATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAGGTGTATTTGCGCCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGGTTACTCGTATTTACTGGACCGACTGGTTCAGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAACAATGCATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAGGTGTATTTGCGCCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGGTTACTCGTATTTACTGGACCGACTGGTTCAGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |
| pilB | Vibrio campbellii strain DS40M4 |
36.261 |
100 |
0.369 |