Detailed information NTG0134115

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BG06_RS13060
• Genome accession: NZ_CP010088
• Coordinates: 2428462..2429589 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470750.1
• Uniprot ID: A0A2C3GXQ0
• Organism: Bacillus thuringiensis strain 97-27
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2423462..2434589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BG06_RS13050 (BG06_2496)	gyrA	2423941..2426412 (-)	2472	WP_001282851.1	DNA gyrase subunit A	-
BG06_RS13055 (BG06_2497)	gyrB	2426501..2428423 (-)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BG06_RS13060 (BG06_2498)	recF	2428462..2429589 (-)	1128	WP_000470750.1	DNA replication/repair protein RecF	Machinery gene
BG06_RS13065 (BG06_2499)	yaaA	2429602..2429814 (-)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
BG06_RS13070 (BG06_2500)	dnaN	2429942..2431081 (-)	1140	WP_001212527.1	DNA polymerase III subunit beta	-
BG06_RS13075 (BG06_2501)	dnaA	2431260..2432600 (-)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
BG06_RS13080 (BG06_2502)	rpmH	2433166..2433300 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
BG06_RS13085 (BG06_2503)	rnpA	2433377..2433736 (+)	360	WP_000726628.1	ribonuclease P protein component	-
BG06_RS13090 (BG06_2504)	spoIIIJ	2433776..2434543 (+)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43334.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=134115 BG06_RS13060 WP_000470750.1 2428462..2429589(-) (recF) [Bacillus thuringiensis strain 97-27]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=134115 BG06_RS13060 WP_000470750.1 2428462..2429589(-) (recF) [Bacillus thuringiensis strain 97-27]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCAAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2C3GXQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651