Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BG06_RS06960 Genome accession   NZ_CP010088
Coordinates   1263125..1263301 (-) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus thuringiensis strain 97-27     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1258125..1268301
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG06_RS06940 (BG06_1285) - 1258747..1259493 (-) 747 WP_000966134.1 YjbA family protein -
  BG06_RS06945 (BG06_1286) - 1259637..1260425 (-) 789 WP_000513287.1 DUF2268 domain-containing protein -
  BG06_RS06950 (BG06_1287) fabF 1260532..1261770 (-) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  BG06_RS06955 (BG06_1288) fabH 1261802..1262734 (-) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  BG06_RS06960 (BG06_1289) comZ 1263125..1263301 (-) 177 WP_009879752.1 ComZ family protein Regulator
  BG06_RS06965 (BG06_1290) - 1263355..1264227 (-) 873 WP_033668777.1 NAD-dependent epimerase/dehydratase family protein -
  BG06_RS06970 (BG06_1291) - 1264257..1264991 (-) 735 WP_000028702.1 hydrolase -
  BG06_RS06975 (BG06_1292) - 1265149..1265331 (+) 183 WP_001211116.1 YjzD family protein -
  BG06_RS06980 (BG06_1293) clpB 1265364..1267964 (-) 2601 WP_000365367.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=134103 BG06_RS06960 WP_009879752.1 1263125..1263301(-) (comZ) [Bacillus thuringiensis strain 97-27]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=134103 BG06_RS06960 WP_009879752.1 1263125..1263301(-) (comZ) [Bacillus thuringiensis strain 97-27]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment