Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   BG06_RS06870 Genome accession   NZ_CP010088
Coordinates   1244139..1244822 (-) Length   227 a.a.
NCBI ID   WP_000350720.1    Uniprot ID   A0A0J1I2I3
Organism   Bacillus thuringiensis strain 97-27     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1239139..1249822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG06_RS06855 (BG06_1269) pepF 1239318..1241144 (-) 1827 WP_000003393.1 oligoendopeptidase F Regulator
  BG06_RS06860 (BG06_1270) - 1241196..1242440 (-) 1245 WP_000612272.1 competence protein CoiA -
  BG06_RS06865 (BG06_1271) - 1242522..1244066 (-) 1545 WP_000799204.1 cardiolipin synthase -
  BG06_RS06870 (BG06_1272) mecA 1244139..1244822 (-) 684 WP_000350720.1 adaptor protein MecA Regulator
  BG06_RS06875 (BG06_1273) - 1245149..1245823 (+) 675 WP_000362617.1 TerC family protein -
  BG06_RS06880 (BG06_1274) spx 1245873..1246268 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  BG06_RS06890 (BG06_1275) - 1246862..1247065 (+) 204 WP_000559980.1 hypothetical protein -
  BG06_RS06895 (BG06_1276) - 1247094..1248740 (-) 1647 WP_000728620.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26994.06 Da        Isoelectric Point: 3.9822

>NTDB_id=134100 BG06_RS06870 WP_000350720.1 1244139..1244822(-) (mecA) [Bacillus thuringiensis strain 97-27]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=134100 BG06_RS06870 WP_000350720.1 1244139..1244822(-) (mecA) [Bacillus thuringiensis strain 97-27]
TTGGATATTGAAAGAATTAATGATCATACGATGAAGTTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAGGAAGAAATTGATCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0J1I2I3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment