Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | QR42_RS00580 | Genome accession | NZ_CP010075 |
| Coordinates | 106846..109281 (+) | Length | 811 a.a. |
| NCBI ID | WP_007496263.1 | Uniprot ID | A0A5K1N9Z5 |
| Organism | Bacillus sp. WP8 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 101846..114281
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QR42_RS00565 (QR42_00565) | - | 104717..105181 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| QR42_RS00570 (QR42_00570) | - | 105196..105753 (+) | 558 | WP_024425862.1 | UvrB/UvrC motif-containing protein | - |
| QR42_RS00575 (QR42_00575) | - | 105758..106849 (+) | 1092 | WP_039175958.1 | protein arginine kinase | - |
| QR42_RS00580 (QR42_00580) | clpC | 106846..109281 (+) | 2436 | WP_007496263.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| QR42_RS00585 (QR42_00585) | radA | 109375..110754 (+) | 1380 | WP_025092231.1 | DNA repair protein RadA | Machinery gene |
| QR42_RS00590 (QR42_00590) | disA | 110757..111836 (+) | 1080 | WP_024425581.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| QR42_RS00595 (QR42_00595) | - | 111990..113090 (+) | 1101 | WP_039182943.1 | PIN/TRAM domain-containing protein | - |
| QR42_RS00600 (QR42_00600) | ispD | 113104..113793 (+) | 690 | WP_039175965.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| QR42_RS00605 (QR42_00605) | ispF | 113797..114273 (+) | 477 | WP_003216928.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90025.76 Da Isoelectric Point: 6.2469
>NTDB_id=134021 QR42_RS00580 WP_007496263.1 106846..109281(+) (clpC) [Bacillus sp. WP8]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=134021 QR42_RS00580 WP_007496263.1 106846..109281(+) (clpC) [Bacillus sp. WP8]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGGGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCAGGCTCTAATAGCAATGCAAAT
ACACCAACACTTGATAGCTTGGCAAGAGATTTGACTGCTATCGCAAAAGAGGACAGCTTGGACCCAGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTCCTAAGTAGAAGAACAAAAAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTACGTGATAAACGAGTA
ATGACACTGGATATGGGAACTGTTGTAGCTGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACACTCATTGGTGCTGGTGGAGCAGAGGGTG
CAATTGATGCGTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATTGGAGCGACAACATTAGATGAG
TACCGTAAATACATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCTTCTGTTGATGA
GAGTATTCAAATCTTAAGAGGACTTAGAGACCGGTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCGATTGAGG
CGGCAGTGAAGCTGTCCGACCGTTATATTTCTGACCGATTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCGGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTC
GTTTCCAGCTGGACGGGAGTGCCTGTTTCGAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAATATGGAACAATTGCT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTTGCTGTAGCGAAAGCTGTGAGACGTGCGCGTGCAGGCCTGAAAG
ATCCAAAACGTCCAATCGGTTCCTTTATCTTCTTAGGACCAACAGGGGTTGGTAAAACAGAGCTTGCAAGAGCACTCGCC
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTTGGGTCACCTCCAGGATATGTCGGTTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TCGTTCTATTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTATTAGAAGATGGTCGTCTG
ACGGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGTTGAA
GCGCAATAAATACGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTAGAGAAGAAACATCTC
AAAGAGATCGTGTCTCTCATGTCTGATCAACTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGAGTAGATCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TAGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACCGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGGGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCAGGCTCTAATAGCAATGCAAAT
ACACCAACACTTGATAGCTTGGCAAGAGATTTGACTGCTATCGCAAAAGAGGACAGCTTGGACCCAGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTCCTAAGTAGAAGAACAAAAAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTACGTGATAAACGAGTA
ATGACACTGGATATGGGAACTGTTGTAGCTGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACACTCATTGGTGCTGGTGGAGCAGAGGGTG
CAATTGATGCGTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATTGGAGCGACAACATTAGATGAG
TACCGTAAATACATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCTTCTGTTGATGA
GAGTATTCAAATCTTAAGAGGACTTAGAGACCGGTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCGATTGAGG
CGGCAGTGAAGCTGTCCGACCGTTATATTTCTGACCGATTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCGGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTC
GTTTCCAGCTGGACGGGAGTGCCTGTTTCGAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAATATGGAACAATTGCT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTTGCTGTAGCGAAAGCTGTGAGACGTGCGCGTGCAGGCCTGAAAG
ATCCAAAACGTCCAATCGGTTCCTTTATCTTCTTAGGACCAACAGGGGTTGGTAAAACAGAGCTTGCAAGAGCACTCGCC
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTTGGGTCACCTCCAGGATATGTCGGTTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TCGTTCTATTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTATTAGAAGATGGTCGTCTG
ACGGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGTTGAA
GCGCAATAAATACGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTAGAGAAGAAACATCTC
AAAGAGATCGTGTCTCTCATGTCTGATCAACTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGAGTAGATCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TAGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACCGCTGCTACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.126 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.088 |
87.916 |
0.432 |
| clpE | Streptococcus mutans UA159 |
53.323 |
79.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |